Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq241 114 2e-20 >seq241 Length=536494 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 149381 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 149439 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 149440 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 149499 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 149500 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 149559 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 149560 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 149618 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 149619 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 149678 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 149679 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 149738 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 149739 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 149798 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 149799 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 149858 Query 75732 GGGTTGA 75738 ||||||| Sbjct 149859 GGGTTGA 149865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567735720000