Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq183 122 1e-22 seq237 113 7e-20 >seq183 Length=66479 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | |||||| | || || ||||| || ||||| ||||| || | Sbjct 26811 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 26752 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || || ||| || || ||||| || || || || || || ||| Sbjct 26751 GATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAA 26692 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| || |||||| ||| |||||||| || ||||| | | ||| | ||||| || ||| Sbjct 26691 CAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAAT 26632 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| | || | ||||| ||||| |||||| | || || Sbjct 26631 ATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGG 26585 >seq237 Length=221212 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 75920 AAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCT 75861 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| |||| ||| || || ||| || ||||| || || || || || || || Sbjct 75860 AGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGAT 75801 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||| || | |||| ||| || || || | || || | || | ||||||||| Sbjct 75800 CAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTAT 75741 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 75740 AACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 75691 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 74094 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74035 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 74034 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 73975 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 73974 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 73915 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052 ||| || || |||||||||| ||||||||||| | ||||| || || Sbjct 73914 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAGT 73864 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 74322 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74263 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 74262 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74203 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 74202 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74143 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 74142 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 74095 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 74550 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74491 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 74490 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74431 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 74430 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74371 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 74370 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 74323 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 74778 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74719 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 74718 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74659 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 74658 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74599 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 74598 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 74551 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 75006 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74947 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 74946 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74887 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 74886 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74827 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 74826 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 74779 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 75234 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75175 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 75174 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75115 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 75114 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75055 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 75054 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 75007 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 75462 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75403 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 75402 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75343 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 75342 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75283 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 75282 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 75235 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | |||||| | || || ||||| || || | || || ||| | Sbjct 75690 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75631 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| ||| || || ||| || ||||| || || || || || || || || Sbjct 75630 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75571 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || | |||| ||| || || || | || || | || | ||||||||||| Sbjct 75570 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75511 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || || |||||||||| ||||||||||| | ||||| || Sbjct 75510 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 75463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731869712900000