Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq237 141 8e-29 seq183 113 4e-20 >seq237 Length=221212 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 74093 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74034 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 74033 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 73974 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 73973 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 73916 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 73915 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 73882 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 74321 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74262 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 74261 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74202 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 74201 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 74144 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 74143 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 74110 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 74549 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74490 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 74489 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74430 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 74429 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 74372 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 74371 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 74338 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 74777 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74718 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 74717 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74658 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 74657 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 74600 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 74599 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 74566 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 75005 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74946 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 74945 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74886 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 74885 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 74828 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 74827 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 74794 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 75233 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75174 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 75173 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75114 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 75113 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 75056 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 75055 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 75022 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 75461 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75402 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 75401 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75342 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 75341 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 75284 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 75283 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 75250 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 75689 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75630 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 75629 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75570 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 75569 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 75512 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 75511 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 75478 Score = 141 bits (156), Expect = 8e-29 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||| || || || || || ||| | | Sbjct 75917 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75858 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| |||||||| || ||||| || ||||||||| Sbjct 75857 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75798 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||||| | || ||||| || ||||| ||||||| ||| | || | |||||||||| Sbjct 75797 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCG-TACAC-TTTCAGATTATA 75740 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||||||||| || ||||| ||||| Sbjct 75739 ACATACAAAAGGAATCGACGCTTCACTTAGTGTT 75706 >seq183 Length=66479 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || ||| | ||||| || || |||||||| || || | |||||||| || Sbjct 26814 ACTATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCC 26755 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | |||| || || ||||| || || || || ||||| || || ||| Sbjct 26754 AGTGATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGAT 26695 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 |||||||| |||| ||||| || || || || || || | | ||||||| || Sbjct 26694 CAACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTAC 26635 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || | || ||||||||| |||| ||||| || Sbjct 26634 AATATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGG 26585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896194070000