Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq183 114 1e-20 seq237 104 2e-17 >seq183 Length=66479 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| ||||| | || || |||||||| || | ||| ||| | | Sbjct 26811 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 26752 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | || || |||||| ||||| || || | || ||||| Sbjct 26751 GATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAA 26692 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || |||| |||| ||| ||||| || || || |||| | || || | |||||||| Sbjct 26691 CAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAAT 26632 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 |||||||| |||||||| ||||| ||||||||||||| || || ||| Sbjct 26631 ATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGGA 26584 >seq237 Length=221212 Score = 104 bits (114), Expect = 2e-17 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||| ||||| ||||| | || || |||||||| ||| | || ||| || Sbjct 75920 AAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCT 75861 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | |||||| | | | ||||| |||||| || || || || | ||| ||| Sbjct 75860 AGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGAT 75801 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || |||| |||| ||| || ||||| ||||||||| ||| | | || || Sbjct 75800 CAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTAT 75741 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792 ||||| |||||||| || ||| | ||| | ||||| || || |||| || ||| | Sbjct 75740 AACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG----AATGCA 75685 Query 107793 AATATTTGTA 107802 |||||||||| Sbjct 75684 AATATTTGTA 75675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875584672250