Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq237 163 4e-35 >seq237 Length=221212 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 74320 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 74261 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 74260 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 74201 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 74200 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 74141 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 74140 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74083 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 74548 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 74489 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 74488 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 74429 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 74428 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 74369 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 74368 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74311 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 74776 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 74717 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 74716 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 74657 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 74656 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 74597 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 74596 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74539 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 75004 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 74945 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 74944 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 74885 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 74884 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 74825 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 74824 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74767 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 75232 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 75173 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 75172 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 75113 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 75112 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 75053 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 75052 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74995 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 75460 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 75401 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 75400 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 75341 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 75340 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 75281 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 75280 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75223 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 75688 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 75629 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 75628 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 75569 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 75568 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 75509 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 75508 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75451 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 75916 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 75857 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 75856 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 75797 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 75796 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 75737 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||||||| |||||||| | || ||||| ||| | | ||||| || | ||||||| Sbjct 75736 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75679 Score = 159 bits (176), Expect = 5e-34 Identities = 171/226 (76%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||||||| | || || ||||| || || |||| || |||| || | Sbjct 74092 TGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGTG 74033 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| || || || ||||| |||||||||| Sbjct 74032 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAAC 73973 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || |||||||| || || | | || | |||||||||| | Sbjct 73972 AACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAACA 73913 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 ||||||| |||||||| | || ||||| ||| | | ||||| || Sbjct 73912 TACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 73867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786163943230000