Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq237 87.8 3e-12 >seq237 Length=221212 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 73901 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 73960 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 73961 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 74020 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 74021 TTTCAATAGTATCAC 74035 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 74129 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 74188 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 74189 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 74248 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 74249 TTTCAATAGTATCAC 74263 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 74357 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 74416 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 74417 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 74476 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 74477 TTTCAATAGTATCAC 74491 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 74585 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 74644 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 74645 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 74704 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 74705 TTTCAATAGTATCAC 74719 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 74813 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 74872 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 74873 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 74932 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 74933 TTTCAATAGTATCAC 74947 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 75041 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 75100 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 75101 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 75160 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 75161 TTTCAATAGTATCAC 75175 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 75269 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 75328 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 75329 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 75388 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 75389 TTTCAATAGTATCAC 75403 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 75497 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 75556 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 75557 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 75616 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 75617 TTTCAATAGTATCAC 75631 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 ||||||| ||||| |||||||| || || || | || ||| || || ||| Sbjct 75725 ATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAA 75784 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | ||||||| ||||||| | || | ||| | ||||| ||||||||||| || |||| || Sbjct 75785 AAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 75844 Query 81760 TTTCAATCGTATTAC 81774 ||||||| |||| || Sbjct 75845 TTTCAATAGTATCAC 75859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903408376840000