Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq241 205 2e-47 >seq241 Length=536494 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Plus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 149431 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 149490 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 149491 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 149550 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 149551 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 149610 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 149611 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 149666 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 149667 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 149726 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 149727 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 149786 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 149787 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 149846 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 149847 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 149906 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 149907 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 149966 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 149967 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 150026 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 150027 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 150086 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 150087 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 150126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808998490250