Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq183 113 4e-20 seq237 111 1e-19 >seq183 Length=66479 Score = 113 bits (124), Expect = 4e-20 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| |||||| | || || ||| | ||||| | ||||| || ||| Sbjct 26811 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 26752 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||||||||| | || || || ||| ||||| ||||| || || || ||||| Sbjct 26751 GATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAA 26692 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 ||| |||| |||| | || || ||||| ||||| | | | ||||| || |||| Sbjct 26691 CAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCA--GACTACA 26634 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATT 25392 ||||||||||||| || || | ||||| ||||| ||||| Sbjct 26633 ATATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATT 26594 >seq237 Length=221212 Score = 111 bits (122), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | |||||||||||| | || || ||| | || || | || || ||| | Sbjct 75920 AAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCT 75861 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 | |||||||| || | ||||| || ||| || || ||||| || || |||||| Sbjct 75860 AGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGAT 75801 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATT 25349 || ||| |||| |||| | || |||||| | || || | | | | | ||| |||| Sbjct 75800 CAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATT 75743 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 75742 ATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 75689 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 74321 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74262 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 74261 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74202 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 74201 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 74144 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 74143 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 74093 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 74549 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74490 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 74489 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74430 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 74429 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 74372 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 74371 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 74321 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 74777 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74718 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 74717 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74658 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 74657 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 74600 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 74599 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 74549 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 75005 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74946 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 74945 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 74886 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 74885 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 74828 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 74827 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 74777 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 75233 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75174 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 75173 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75114 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 75113 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 75056 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 75055 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 75005 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 75461 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75402 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 75401 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75342 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 75341 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 75284 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 75283 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 75233 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 75689 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 75630 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 75629 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 75570 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 75569 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 75512 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | || ||||| ||||| || |||| ||||||||||| ||||||| |||| Sbjct 75511 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAA 75461 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | || || | || || ||| | | Sbjct 74093 ATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAGT 74034 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | ||||| || ||| || || ||||| || || |||||||| Sbjct 74033 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAA 73974 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 ||| |||| |||| | || |||||| | || || | | | | | ||| ||||| | Sbjct 73973 CAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCA--GATTATA 73916 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 | || ||||| ||||| || |||| ||||||||||| ||||||| ||| Sbjct 73915 ACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGA 73866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093009080000