Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq241 118 1e-21 >seq241 Length=536494 Score = 118 bits (130), Expect = 1e-21 Identities = 322/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Minus Query 111557 TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGA 111616 ||||||| ||||||||||||||||| ||||||| | | || | || ||| || Sbjct 149865 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 149806 Query 111617 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 111676 | ||| || ||| ||||| ||||| || ||||| || | ||||| || |||||| Sbjct 149805 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 149746 Query 111677 GGCTCAAGATAGACTGCGATAGATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGC 111733 ||||| || |||| || | || || |||| | ||| | |||| ||||| || Sbjct 149745 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 149686 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || || | || |||| | ||||| || ||||| |||| || || |||||||| || Sbjct 149685 GCAGTATCATTGAATATTCTGAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCG 149626 Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC-ATCCCAATACCCCCAGCCCA 111852 ||||| || | ||| | | | || || ||| | || || || || || Sbjct 149625 CGAATGTATGAACTGGAGGCACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGT 149567 Query 111853 CTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTT 111912 ||| || | ||||| | ||||| || || | ||||| || || || ||||| Sbjct 149566 CTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTT 149507 Query 111913 GTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGT 111972 | | | ||||||||| || ||||| || || | || |||| |||||||| || Sbjct 149506 AATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGT 149447 Query 111973 TGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031 || || ||||| || || || ||| |||||| | | ||| ||||||| | || || Sbjct 149446 GGGAGTGGCGTGGATAAATAATTTCTT-GGACATGTAATTGTAAGTCTCCATGGCACGAT 149388 Query 112032 CAATGTC 112038 |||| || Sbjct 149387 CAATATC 149381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030037400000