Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq237 127 4e-24 >seq237 Length=221212 Score = 127 bits (140), Expect = 4e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 75726 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 75785 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 75786 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 75845 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 75846 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 75905 Query 283088 GAATATCTGCATTTT 283102 ||||| |||||||| Sbjct 75906 AAATATTTGCATTTT 75920 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 73902 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 73961 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 73962 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 74021 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 74022 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 74081 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 74082 AAATATTTGCATT 74094 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 74130 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 74189 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 74190 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 74249 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 74250 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 74309 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 74310 AAATATTTGCATT 74322 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 74358 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 74417 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 74418 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 74477 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 74478 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 74537 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 74538 AAATATTTGCATT 74550 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 74586 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 74645 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 74646 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 74705 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 74706 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 74765 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 74766 AAATATTTGCATT 74778 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 74814 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 74873 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 74874 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 74933 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 74934 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 74993 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 74994 AAATATTTGCATT 75006 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 75042 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 75101 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 75102 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 75161 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 75162 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 75221 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 75222 AAATATTTGCATT 75234 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 75270 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 75329 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 75330 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 75389 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 75390 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 75449 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 75450 AAATATTTGCATT 75462 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| || || | ||| || || || ||||| | |||||| || ||||| Sbjct 75498 TTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAA 75557 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct 75558 AATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATT 75617 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||| || || || || || || |||||||| | || || || Sbjct 75618 TTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTAC 75677 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 75678 AAATATTTGCATT 75690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735847163500