Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq125 87.8 4e-12 seq109 87.8 4e-12 seq37 87.8 4e-12 seq33 87.8 4e-12 seq32 87.8 4e-12 >seq125 Length=210264 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 100871 TAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 100816 >seq109 Length=191926 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 41494 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGCCAGGGGTTCGAGCCCC 41549 >seq37 Length=216676 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 33285 TAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 33340 >seq33 Length=143971 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 100871 TAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 100816 >seq32 Length=149697 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 116413 TAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 116358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822102528200