Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq125 95.1 1e-14 seq92 95.1 1e-14 seq65 95.1 1e-14 seq37 95.1 1e-14 seq33 95.1 1e-14 seq32 95.1 1e-14 >seq125 Length=210264 Score = 95.1 bits (104), Expect = 1e-14 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||||| ||||| | || || |||| |||||| | |||||| | || Sbjct 52117 TTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCCA 52058 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || || ||||||| | ||||| || || | ||| || |||| | ||| Sbjct 52057 GTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACAACTTGGCATATGTAGGC 51998 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||||||| | || | ||| ||| ||| || || || || || |||||||| ||| Sbjct 51997 TGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCTGCC 51938 Query 22286 ATATTTATCAATG--TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | || | | | | | || | ||||||||||| |||||||| | | | | || Sbjct 51937 ATGTCAATTATCGCCTTCTGTTTGA--TCTCCCATACGGTTTTGTACAGATTCTTTAGCT 51880 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT---TT 22400 || ||||| ||||| | || | || ||| | || | || || || || Sbjct 51879 CTTGTGGTATTTCATCGATGTTTTGTAAACTTCCATTA-TATGCA--ATTAATTTTTGTT 51823 Query 22401 TAATCGTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || ||||| | | || || | |||||| || | | ||| | || || Sbjct 51822 TCATTTGGTCATTCCAGAGATCCAATTG-AACCAAATCATTCAATAAATGGGGATTTACA 51764 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || ||| ||||| || | |||||| || | ||||| ||| | ||| | ||||| ||| Sbjct 51763 ACGAAAAATTCGCCAGAAAGGACGCGACGATAATAAATATTGCAAGTGTAAGGTTCAAAA 51704 Query 22520 GATTCATTGTTTCC 22533 ||||| ||||||| Sbjct 51703 GATTCGCTGTTTCC 51690 >seq92 Length=443471 Score = 95.1 bits (104), Expect = 1e-14 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 57990 GCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACG 58048 || || ||||| || || |||||||| ||||| |||| || |||||||| |||| ||||| Sbjct 401872 GCAGTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCA-TATTTTGGCTGAAAAAACG 401930 Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108 ||| || |||||||| || || ||| |||||| | || || | ||||||||||| || Sbjct 401931 CGGGCTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCAGGGACGAGGGTCTACA 401990 Query 58109 TACTGATTTTG 58119 | || |||| Sbjct 401991 CGCCGAGTTTG 402001 >seq65 Length=192560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| || ||||| || || || || ||||| || ||| | || || ||||| Sbjct 118461 AAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACC 118520 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || | | | |||| || || | || |||||||| || | || ||||| Sbjct 118521 TAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGA 118580 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGAT 31366 || || || ||||| || ||||| ||||| ||||| ||| || ||| | || || Sbjct 118581 TCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAG--AT 118638 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| ||||| |||||||| ||||| | || | || ||||| || || Sbjct 118639 TATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 118691 >seq37 Length=216676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Plus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||||| ||||| | || || |||| |||||| | |||||| | || Sbjct 82039 TTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCCA 82098 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || || ||||||| | ||||| || || | ||| || |||| | ||| Sbjct 82099 GTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACAACTTGGCATATGTAGGC 82158 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||||||| | || | ||| ||| ||| || || || || || |||||||| ||| Sbjct 82159 TGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCTGCC 82218 Query 22286 ATATTTATCAATG--TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | || | | | | | || | ||||||||||| |||||||| | | | | || Sbjct 82219 ATGTCAATTATCGCCTTCTGTTTGA--TCTCCCATACGGTTTTGTACAGATTCTTTAGCT 82276 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT---TT 22400 || ||||| ||||| | || | || ||| | || | || || || || Sbjct 82277 CTTGTGGTATTTCATCGATGTTTTGTAAACTTCCATTA-TATGCA--ATTAATTTTTGTT 82333 Query 22401 TAATCGTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || ||||| | | || || | |||||| || | | ||| | || || Sbjct 82334 TCATTTGGTCATTCCAGAGATCCAATTG-AACCAAATCATTCAATAAATGGGGATTTACA 82392 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || ||| ||||| || | |||||| || | ||||| ||| | ||| | ||||| ||| Sbjct 82393 ACGAAAAATTCGCCAGAAAGGACGCGACGATAATAAATATTGCAAGTGTAAGGTTCAAAA 82452 Query 22520 GATTCATTGTTTCC 22533 ||||| ||||||| Sbjct 82453 GATTCGCTGTTTCC 82466 >seq33 Length=143971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||||| ||||| | || || |||| |||||| | |||||| | || Sbjct 52117 TTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCCA 52058 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || || ||||||| | ||||| || || | ||| || |||| | ||| Sbjct 52057 GTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACAACTTGGCATATGTAGGC 51998 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||||||| | || | ||| ||| ||| || || || || || |||||||| ||| Sbjct 51997 TGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCTGCC 51938 Query 22286 ATATTTATCAATG--TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | || | | | | | || | ||||||||||| |||||||| | | | | || Sbjct 51937 ATGTCAATTATCGCCTTCTGTTTGA--TCTCCCATACGGTTTTGTACAGATTCTTTAGCT 51880 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT---TT 22400 || ||||| ||||| | || | || ||| | || | || || || || Sbjct 51879 CTTGTGGTATTTCATCGATGTTTTGTAAACTTCCATTA-TATGCA--ATTAATTTTTGTT 51823 Query 22401 TAATCGTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || ||||| | | || || | |||||| || | | ||| | || || Sbjct 51822 TCATTTGGTCATTCCAGAGATCCAATTG-AACCAAATCATTCAATAAATGGGGATTTACA 51764 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || ||| ||||| || | |||||| || | ||||| ||| | ||| | ||||| ||| Sbjct 51763 ACGAAAAATTCGCCAGAAAGGACGCGACGATAATAAATATTGCAAGTGTAAGGTTCAAAA 51704 Query 22520 GATTCATTGTTTCC 22533 ||||| ||||||| Sbjct 51703 GATTCGCTGTTTCC 51690 >seq32 Length=149697 Score = 95.1 bits (104), Expect = 1e-14 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||||| ||||| | || || |||| |||||| | |||||| | || Sbjct 67659 TTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCCA 67600 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || || ||||||| | ||||| || || | ||| || |||| | ||| Sbjct 67599 GTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACAACTTGGCATATGTAGGC 67540 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||||||| | || | ||| ||| ||| || || || || || |||||||| ||| Sbjct 67539 TGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCTGCC 67480 Query 22286 ATATTTATCAATG--TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | || | | | | | || | ||||||||||| |||||||| | | | | || Sbjct 67479 ATGTCAATTATCGCCTTCTGTTTGA--TCTCCCATACGGTTTTGTACAGATTCTTTAGCT 67422 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT---TT 22400 || ||||| ||||| | || | || ||| | || | || || || || Sbjct 67421 CTTGTGGTATTTCATCGATGTTTTGTAAACTTCCATTA-TATGCA--ATTAATTTTTGTT 67365 Query 22401 TAATCGTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || ||||| | | || || | |||||| || | | ||| | || || Sbjct 67364 TCATTTGGTCATTCCAGAGATCCAATTG-AACCAAATCATTCAATAAATGGGGATTTACA 67306 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || ||| ||||| || | |||||| || | ||||| ||| | ||| | ||||| ||| Sbjct 67305 ACGAAAAATTCGCCAGAAAGGACGCGACGATAATAAATATTGCAAGTGTAAGGTTCAAAA 67246 Query 22520 GATTCATTGTTTCC 22533 ||||| ||||||| Sbjct 67245 GATTCGCTGTTTCC 67232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765619908800