Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq125 143 2e-29 seq37 143 2e-29 seq33 143 2e-29 seq32 143 2e-29 >seq125 Length=210264 Score = 143 bits (158), Expect = 2e-29 Identities = 406/621 (65%), Gaps = 2/621 (0%) Strand=Plus/Minus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||||||| | ||| || | ||||| || | || |||| ||| || ||| ||| Sbjct 50870 TATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACACTCATCTGGGCAC 50811 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | || ||| | ||||| ||| || | || ||| || | || || | ||| ||| Sbjct 50810 ATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTCTGGGATCCACAAT 50751 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || || || | | || | || || || || |||| || ||| Sbjct 50750 GCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGG 50691 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || |||||||| |||||||| |||| || || | | || ||| |||||| Sbjct 50690 AATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTT 50631 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || ||| | | | || | ||| ||||||| | |||||||| || Sbjct 50630 CCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAGCATAGGTATAATC 50571 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || ||| | ||| || || | || || ||||| || ||| Sbjct 50570 CCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGAGGCACGTATTTTGTGTATT 50511 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAA-GCGCATTGTTTTAACGTATCAAA 38348 | || ||||| || ||||| ||| || || | | || ||||| | | || ||||| Sbjct 50510 GCTAAACCTATCCCTCCTGC-TGTCTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAA 50452 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 ||||| ||| |||||||| || || | || || |||||||||||||| || Sbjct 50451 AATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAA 50392 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | |||||| | ||| || | ||| |||| || || || || |||| | |||| || Sbjct 50391 TTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAATAATTTCTTGGACATGTA 50332 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||| || || || || || ||| |||||| | ||| ||||| || || || | Sbjct 50331 ATTGTAAGTCTCCATGGCACGATCAATATCATTGGAGTGTATACCGCAAGCAACTCTGAC 50272 Query 38529 TAGCATATGTTGTGGTCTTTC 38549 || | ||| || || ||||| Sbjct 50271 GAGAAGATGCTGAGGCCTTTC 50251 >seq37 Length=216676 Score = 143 bits (158), Expect = 2e-29 Identities = 406/621 (65%), Gaps = 2/621 (0%) Strand=Plus/Plus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||||||| | ||| || | ||||| || | || |||| ||| || ||| ||| Sbjct 83286 TATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACACTCATCTGGGCAC 83345 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | || ||| | ||||| ||| || | || ||| || | || || | ||| ||| Sbjct 83346 ATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTCTGGGATCCACAAT 83405 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || || || | | || | || || || || |||| || ||| Sbjct 83406 GCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGG 83465 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || |||||||| |||||||| |||| || || | | || ||| |||||| Sbjct 83466 AATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTT 83525 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || ||| | | | || | ||| ||||||| | |||||||| || Sbjct 83526 CCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAGCATAGGTATAATC 83585 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || ||| | ||| || || | || || ||||| || ||| Sbjct 83586 CCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGAGGCACGTATTTTGTGTATT 83645 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAA-GCGCATTGTTTTAACGTATCAAA 38348 | || ||||| || ||||| ||| || || | | || ||||| | | || ||||| Sbjct 83646 GCTAAACCTATCCCTCCTGC-TGTCTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAA 83704 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 ||||| ||| |||||||| || || | || || |||||||||||||| || Sbjct 83705 AATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAA 83764 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | |||||| | ||| || | ||| |||| || || || || |||| | |||| || Sbjct 83765 TTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAATAATTTCTTGGACATGTA 83824 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||| || || || || || ||| |||||| | ||| ||||| || || || | Sbjct 83825 ATTGTAAGTCTCCATGGCACGATCAATATCATTGGAGTGTATACCGCAAGCAACTCTGAC 83884 Query 38529 TAGCATATGTTGTGGTCTTTC 38549 || | ||| || || ||||| Sbjct 83885 GAGAAGATGCTGAGGCCTTTC 83905 >seq33 Length=143971 Score = 143 bits (158), Expect = 2e-29 Identities = 406/621 (65%), Gaps = 2/621 (0%) Strand=Plus/Minus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||||||| | ||| || | ||||| || | || |||| ||| || ||| ||| Sbjct 50870 TATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACACTCATCTGGGCAC 50811 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | || ||| | ||||| ||| || | || ||| || | || || | ||| ||| Sbjct 50810 ATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTCTGGGATCCACAAT 50751 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || || || | | || | || || || || |||| || ||| Sbjct 50750 GCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGG 50691 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || |||||||| |||||||| |||| || || | | || ||| |||||| Sbjct 50690 AATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTT 50631 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || ||| | | | || | ||| ||||||| | |||||||| || Sbjct 50630 CCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAGCATAGGTATAATC 50571 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || ||| | ||| || || | || || ||||| || ||| Sbjct 50570 CCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGAGGCACGTATTTTGTGTATT 50511 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAA-GCGCATTGTTTTAACGTATCAAA 38348 | || ||||| || ||||| ||| || || | | || ||||| | | || ||||| Sbjct 50510 GCTAAACCTATCCCTCCTGC-TGTCTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAA 50452 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 ||||| ||| |||||||| || || | || || |||||||||||||| || Sbjct 50451 AATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAA 50392 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | |||||| | ||| || | ||| |||| || || || || |||| | |||| || Sbjct 50391 TTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAATAATTTCTTGGACATGTA 50332 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||| || || || || || ||| |||||| | ||| ||||| || || || | Sbjct 50331 ATTGTAAGTCTCCATGGCACGATCAATATCATTGGAGTGTATACCGCAAGCAACTCTGAC 50272 Query 38529 TAGCATATGTTGTGGTCTTTC 38549 || | ||| || || ||||| Sbjct 50271 GAGAAGATGCTGAGGCCTTTC 50251 >seq32 Length=149697 Score = 143 bits (158), Expect = 2e-29 Identities = 406/621 (65%), Gaps = 2/621 (0%) Strand=Plus/Minus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||||||| | ||| || | ||||| || | || |||| ||| || ||| ||| Sbjct 66412 TATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACACTCATCTGGGCAC 66353 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | || ||| | ||||| ||| || | || ||| || | || || | ||| ||| Sbjct 66352 ATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTCTGGGATCCACAAT 66293 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || || || | | || | || || || || |||| || ||| Sbjct 66292 GCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGG 66233 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || |||||||| |||||||| |||| || || | | || ||| |||||| Sbjct 66232 AATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTT 66173 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || ||| | | | || | ||| ||||||| | |||||||| || Sbjct 66172 CCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAGCATAGGTATAATC 66113 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || ||| | ||| || || | || || ||||| || ||| Sbjct 66112 CCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGAGGCACGTATTTTGTGTATT 66053 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAA-GCGCATTGTTTTAACGTATCAAA 38348 | || ||||| || ||||| ||| || || | | || ||||| | | || ||||| Sbjct 66052 GCTAAACCTATCCCTCCTGC-TGTCTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAA 65994 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 ||||| ||| |||||||| || || | || || |||||||||||||| || Sbjct 65993 AATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAA 65934 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | |||||| | ||| || | ||| |||| || || || || |||| | |||| || Sbjct 65933 TTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAATAATTTCTTGGACATGTA 65874 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||| || || || || || ||| |||||| | ||| ||||| || || || | Sbjct 65873 ATTGTAAGTCTCCATGGCACGATCAATATCATTGGAGTGTATACCGCAAGCAACTCTGAC 65814 Query 38529 TAGCATATGTTGTGGTCTTTC 38549 || | ||| || || ||||| Sbjct 65813 GAGAAGATGCTGAGGCCTTTC 65793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523980081600