Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq125 271 2e-67 seq37 271 2e-67 seq33 271 2e-67 seq32 271 2e-67 >seq125 Length=210264 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Plus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 50217 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 50276 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 50277 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 50334 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 50335 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 50394 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 50395 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 50454 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 50455 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 50514 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 50515 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 50572 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 50573 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 50632 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 50633 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 50692 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 50693 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 50752 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 50753 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 50812 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 50813 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 50872 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 50873 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 50932 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 50933 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 50992 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 50993 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 51052 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 51053 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 51101 >seq37 Length=216676 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Minus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 83939 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 83880 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 83879 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 83822 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 83821 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 83762 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 83761 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 83702 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 83701 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 83642 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 83641 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 83584 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 83583 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 83524 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 83523 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 83464 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 83463 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 83404 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 83403 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 83344 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 83343 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 83284 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 83283 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 83224 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 83223 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 83164 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 83163 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 83104 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 83103 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 83055 >seq33 Length=143971 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Plus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 50217 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 50276 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 50277 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 50334 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 50335 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 50394 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 50395 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 50454 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 50455 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 50514 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 50515 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 50572 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 50573 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 50632 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 50633 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 50692 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 50693 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 50752 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 50753 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 50812 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 50813 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 50872 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 50873 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 50932 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 50933 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 50992 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 50993 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 51052 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 51053 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 51101 >seq32 Length=149697 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Plus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 65759 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 65818 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 65819 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 65876 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 65877 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 65936 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 65937 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 65996 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 65997 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 66056 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 66057 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 66114 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 66115 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 66174 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 66175 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 66234 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 66235 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 66294 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 66295 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 66354 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 66355 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 66414 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 66415 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 66474 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 66475 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 66534 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 66535 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 66594 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 66595 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 66643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351262109480