Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq111 313 3e-80 seq32 147 3e-30 >seq111 Length=598171 Score = 313 bits (346), Expect = 3e-80 Identities = 1074/1661 (65%), Gaps = 40/1661 (2%) Strand=Plus/Plus Query 6508 TTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC---CTTTTTCGCGTA 6564 ||||||| |||||| ||||| || || ||||||| | || || | | ||| | Sbjct 218074 TTTCATTGAATAACAATAGTTCTCAAGTTCATTCTTGGATTCAACACACCTCTTC---TT 218130 Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||||||||| || || || |||| || || || |||||| | |||||||||| | Sbjct 218131 CTTTTCATCATCTTCCCTAAACTTCTCTGCTTCAGCAACCATCCTATCAATGTCTTGCTG 218190 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||| ||||| || || || | | ||| | || || | | ||| || Sbjct 218191 TGAAAGTCTTCCCTTGTCATTTGTTATAGTTACATGTTCAGTCTTTCCTGTCGACTTGTC 218250 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| || |||| |||||||| ||||| | || || | || ||||| || || Sbjct 218251 GGCAGCAGACACTGTCAATATACCATTGGCATCGATGTCAAAGGTGACTTTAATCTGGGG 218310 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || || || | || || || || |||| ||| | || |||||| |||| || Sbjct 218311 AACTCCTCTTGGAGCAGGAGGTATGCCAGTCAAATGGAATTTGCCTAGTAAATTGTTGTC 218370 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| |||| | || | ||| | | ||| |||| || Sbjct 218371 ACATGTCATAGAACGTTCTCCTTCGAAGACCTGGATCATAACCCCCGTTTGGTTATTTTC 218430 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| || |||||| ||||| | || || || |||||||| || || | | Sbjct 218431 ATTGGTTGTAAATTCTTGTTCCTTCTTGGCGGGGATAGTAGTATTTCTGGGTATCAGCAC 218490 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || || || ||||| || ||||| || || || || | |||| Sbjct 218491 GGTCATAACACCGCCGGCGGTCTCAAGTCCTAGTGACAGTGGAGTGACATCTA---GTAA 218547 Query 6985 CAGG---TCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 ||| ||||| || ||||| ||| || ||||| || || || || || Sbjct 218548 CAGTAAATCTTGGACCTTGCTAGATTG------TTCGCCAGTTAAAATTGCAGCCTGAAC 218601 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||| || || || || || || || |||||||| | ||| ||||||| || || Sbjct 218602 AGCCGCGCCATAGGCTACTGCTTCGTCTGGGTTAATTGATTTGCAGGGTTCTTTGCCATT 218661 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 ||| | ||| | || ||| || || || ||||| || ||||| || || || | || Sbjct 218662 GAAAAAGTCCTTAATCAATTGCTGTATCTTAGGGATACGGGTCGAACCTCCTACAAGTAC 218721 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTT 7214 | ||||| | | | ||||| || | || || | ||| | ||||||||| || Sbjct 218722 CACTTCATGGATCTGCTTCTTATCCATATCTGCATCAGCTAAG-GCTTTTTCGACTGGGA 218780 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | || ||||| || ||| || ||||| || | || | || ||| Sbjct 218781 TTAAAGTGTTTTTGAACATTTCGGCACAGAGCTCCTCGAATCTGGCCCTAGTGATGTTGC 218840 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | | | || | ||| || ||| | || | |||| || | |||| | | Sbjct 218841 AACTGTAGTCGATGCCATCAAATATAGCTTCTACAACAATCGTGGCCTGTGTTGAGTGGG 218900 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 |||| || || || || || ||||| |||| | | ||| | ||||| || Sbjct 218901 ATAAGGTGCGTTTAGCACGTTCACATTGTGTTCTAAGTCTACGTAATGCACGTCTATTGG 218960 Query 7395 CGGAAATATCTTTCTT---ATGTTTACGTTTAAACTCTTCAGAG-AAGTGTCGAAGGAGT 7450 ||||||| ||| || || || ||||| || || | || || || | | Sbjct 218961 TTGAAATATTCTTCCCGCCATTCTTTCGCTTAAAGTCATCTACGCAAAAGTTGACCAA-T 219019 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || || ||||| |||||||| ||||| || || || || || ||||| Sbjct 219020 CTGTTGTCAAAGTCCTCACCGCCCAAGTGGGTATCACCTTGTGTGGCCTTTACCTCAAAA 219079 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || |||| || |||| | || ||||| || || ||||| |||| || ||||| Sbjct 219080 ATGCCATCTTCGATAGTTAAAATTGATACATCGAAAGTGCCACCGCCCAAATCGAAAATC 219139 Query 7571 AGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | || || | || | || | ||||| || | ||| || || || || || || || Sbjct 219140 AACACATTTTTTTCAGAAGTACCT-TTCTTGTCCATACCATAGGCAATTGCGGCAGCAGT 219198 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| |||||||| | | || | |||||||| || | || || || || || Sbjct 219199 TGGTTCATTGATAATACGCATAACATTTAACCCAGCAATGGTACCAGCGTCCTTAGTGGC 219258 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| ||||||||||| || || || || || | || || | | || | |||| Sbjct 219259 CTGTCGTTGAGAATCGTTAAAATAAGCGGGTACAGTGATAACAGCATTAGAGATTGTCTT 219318 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| ||||| || || || ||||| ||||| || ||||| || || || || || Sbjct 219319 TCCCAAATAAGATTCTGCAATTTCCTTCATCTTGGTGAGGACCATAGAAGATATTTCCTC 219378 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || ||| |||||||| | ||| | || | |||| || ||||| | Sbjct 219379 TGGGTGGAAGGATTTAGTTTCACCCTGAAATTGTACCTTGATCACAGGCTTATCATTTGG 219438 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG--TCCGAA 7927 || | ||| || | | ||| | ||| ||||| ||||| || || || Sbjct 219439 TCCAGCCGCAACAGTAAATGGCCAGTGTTTTATATCACTTTGGA--TGCAGGGATCATTG 219496 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 | |||||| || || | | |||||||||||||||||||||| || || | || Sbjct 219497 ATCTTTCTCCCTATCAATCTTTTTGCATCAAAAACTGTGTTTTCAGGATTTCTAGCATCC 219556 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || ||||| || | | || || | || || || || || || || Sbjct 219557 TGATTTTTGGCGGCGTCGCCAACCAATCGCTCCACA---TCAGTGAAGGCAACATAAGAC 219613 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || || || || ||||| || || || ||||||||||| || |||| ||| ||| Sbjct 219614 GGAGTTGTACGGTTGCCTTGATCATTGGCTATAATTTCTACAGTTTCATTTTTCCAAACG 219673 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| |||||||| || || || Sbjct 219674 CCAACACATGAGTAAGTGGTTCCCAAATCAATCCCAATAGC 219714 >seq32 Length=149697 Score = 147 bits (162), Expect = 3e-30 Identities = 239/339 (71%), Gaps = 9/339 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||||||||| || | ||| ||||| || | |||||| |||||||||| | ||| Sbjct 4824 ATCAAAATCTTCACCGCCGAGGTGAGTATCTCCTGATGTCGCTATGACTTCAAATACACC 4883 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||| | | | ||||||||||| ||||||||||| || ||| | | | | Sbjct 4884 GTTGTCAATTGTAAGTAGGGAAACATCAAAAGTACCACCACCGAGATCATAGACCAAAAT 4943 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || || || || || ||||| || || ||||| || || || ||||| Sbjct 4944 ATTTTTTTCTTCATC---CTTATTGTCAAGACCATAAGCAATAGCAGCGGCTGTGGGTTC 5000 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 ||| | ||||| || ||| |||| |||||||| ||| | |||||||| || ||||| Sbjct 5001 ATTGAGTATACGTAATACA-TTCAAACCAGCAAT--TTGACCTGCATCTTTGGTAGCTTG 5057 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||| ||||| || || || || || || || || | | ||| ||| ||| Sbjct 5058 GCGCTGGGCATCATTAAAATATGCAGGAACTGTCACAACGGCATTTTTAACTGTCTGACC 5117 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 |||| | ||| || || |||||||||| ||| || Sbjct 5118 GAGAAAGTTTTCGGCCATGCTCTTCATTTTGGAAAGCAC 5156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131688517600