Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq125 174 2e-38 seq37 174 2e-38 seq33 174 2e-38 seq32 174 2e-38 >seq125 Length=210264 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 51065 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 51006 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 51005 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 50946 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 50945 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 50887 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 50886 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 50827 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 50826 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 50767 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 50766 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 50707 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 50706 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 50647 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 50646 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 50587 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || ||| || Sbjct 50586 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGA-GG 50528 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 50527 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 50469 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 50468 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 50409 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 50408 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 50350 >seq37 Length=216676 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Plus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 83091 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 83150 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 83151 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 83210 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 83211 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 83269 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 83270 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 83329 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 83330 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 83389 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 83390 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 83449 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 83450 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 83509 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 83510 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 83569 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || || | || Sbjct 83570 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAAC-TGGAGG 83628 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 83629 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 83687 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 83688 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 83747 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 83748 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 83806 >seq33 Length=143971 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 51065 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 51006 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 51005 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 50946 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 50945 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 50887 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 50886 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 50827 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 50826 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 50767 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 50766 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 50707 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 50706 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 50647 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 50646 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 50587 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || ||| || Sbjct 50586 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGA-GG 50528 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 50527 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 50469 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 50468 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 50409 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 50408 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 50350 >seq32 Length=149697 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 66607 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 66548 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 66547 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 66488 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 66487 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 66429 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 66428 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 66369 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 66368 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 66309 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 66308 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 66249 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 66248 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 66189 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 66188 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 66129 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || ||| || Sbjct 66128 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGA-GG 66070 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 66069 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 66011 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 66010 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 65951 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 65950 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 65892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974969292000