Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq125 89.7 1e-12 seq37 89.7 1e-12 seq33 89.7 1e-12 seq32 89.7 1e-12 >seq125 Length=210264 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 || || | |||||| ||||| |||| ||||| || ||||| |||||| | ||| | Sbjct 50783 ACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGAC 50724 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||| |||||| || |||||||| || ||||| || || || ||||| ||| Sbjct 50723 TCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGC 50664 Query 213933 TCCATGTAGATGGCAAA 213949 || | |||||||||||| Sbjct 50663 TCTAGGTAGATGGCAAA 50647 >seq37 Length=216676 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 || || | |||||| ||||| |||| ||||| || ||||| |||||| | ||| | Sbjct 83373 ACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGAC 83432 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||| |||||| || |||||||| || ||||| || || || ||||| ||| Sbjct 83433 TCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGC 83492 Query 213933 TCCATGTAGATGGCAAA 213949 || | |||||||||||| Sbjct 83493 TCTAGGTAGATGGCAAA 83509 >seq33 Length=143971 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 || || | |||||| ||||| |||| ||||| || ||||| |||||| | ||| | Sbjct 50783 ACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGAC 50724 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||| |||||| || |||||||| || ||||| || || || ||||| ||| Sbjct 50723 TCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGC 50664 Query 213933 TCCATGTAGATGGCAAA 213949 || | |||||||||||| Sbjct 50663 TCTAGGTAGATGGCAAA 50647 >seq32 Length=149697 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 || || | |||||| ||||| |||| ||||| || ||||| |||||| | ||| | Sbjct 66325 ACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGAC 66266 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||| |||||| || |||||||| || ||||| || || || ||||| ||| Sbjct 66265 TCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGC 66206 Query 213933 TCCATGTAGATGGCAAA 213949 || | |||||||||||| Sbjct 66205 TCTAGGTAGATGGCAAA 66189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531169817600