Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq125 131 9e-26 seq37 131 9e-26 seq33 131 9e-26 seq32 131 9e-26 >seq125 Length=210264 Score = 131 bits (144), Expect = 9e-26 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | ||| || | ||||| ||||||| |||||| || || || || || || Sbjct 50786 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 50727 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || ||| || || || ||| |||||||| ||| ||||||||||| | |||||| Sbjct 50726 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 50667 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||||||||||||||| || || ||||| || || | Sbjct 50666 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 50607 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159 ||||| |||||||| | | | | ||| || | |||| ||| | ||| || ||||||| Sbjct 50606 GCAGTATCATTGAATATTCTGAGCATAGGTA-TAATCCCATTGGAATGCCCATTTGTGC 50549 >seq37 Length=216676 Score = 131 bits (144), Expect = 9e-26 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | ||| || | ||||| ||||||| |||||| || || || || || || Sbjct 83370 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 83429 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || ||| || || || ||| |||||||| ||| ||||||||||| | |||||| Sbjct 83430 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 83489 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||||||||||||||| || || ||||| || || | Sbjct 83490 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 83549 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159 ||||| |||||||| | | | | ||| || | |||| ||| | ||| || ||||||| Sbjct 83550 GCAGTATCATTGAATATTCTGAGCATAGGTA-TAATCCCATTGGAATGCCCATTTGTGC 83607 >seq33 Length=143971 Score = 131 bits (144), Expect = 9e-26 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | ||| || | ||||| ||||||| |||||| || || || || || || Sbjct 50786 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 50727 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || ||| || || || ||| |||||||| ||| ||||||||||| | |||||| Sbjct 50726 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 50667 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||||||||||||||| || || ||||| || || | Sbjct 50666 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 50607 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159 ||||| |||||||| | | | | ||| || | |||| ||| | ||| || ||||||| Sbjct 50606 GCAGTATCATTGAATATTCTGAGCATAGGTA-TAATCCCATTGGAATGCCCATTTGTGC 50549 >seq32 Length=149697 Score = 131 bits (144), Expect = 9e-26 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | ||| || | ||||| ||||||| |||||| || || || || || || Sbjct 66328 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 66269 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || ||| || || || ||| |||||||| ||| ||||||||||| | |||||| Sbjct 66268 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 66209 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||||||||||||||| || || ||||| || || | Sbjct 66208 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 66149 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159 ||||| |||||||| | | | | ||| || | |||| ||| | ||| || ||||||| Sbjct 66148 GCAGTATCATTGAATATTCTGAGCATAGGTA-TAATCCCATTGGAATGCCCATTTGTGC 66091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039568250500