Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq125 114 2e-20 seq37 114 2e-20 seq33 114 2e-20 seq32 114 2e-20 >seq125 Length=210264 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 50302 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 50360 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 50361 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 50420 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 50421 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 50480 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 50481 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 50539 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 50540 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 50599 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 50600 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 50659 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 50660 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 50719 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 50720 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 50779 Query 75732 GGGTTGA 75738 ||||||| Sbjct 50780 GGGTTGA 50786 >seq37 Length=216676 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Minus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 83854 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 83796 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 83795 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 83736 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 83735 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 83676 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 83675 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 83617 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 83616 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 83557 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 83556 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 83497 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 83496 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 83437 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 83436 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 83377 Query 75732 GGGTTGA 75738 ||||||| Sbjct 83376 GGGTTGA 83370 >seq33 Length=143971 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 50302 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 50360 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 50361 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 50420 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 50421 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 50480 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 50481 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 50539 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 50540 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 50599 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 50600 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 50659 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 50660 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 50719 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 50720 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 50779 Query 75732 GGGTTGA 75738 ||||||| Sbjct 50780 GGGTTGA 50786 >seq32 Length=149697 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 65844 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 65902 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 65903 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 65962 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 65963 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 66022 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 66023 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 66081 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 66082 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 66141 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 66142 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 66201 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 66202 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 66261 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 66262 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 66321 Query 75732 GGGTTGA 75738 ||||||| Sbjct 66322 GGGTTGA 66328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568556003200