Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq65 138 2e-27 seq56 134 2e-26 >seq65 Length=192560 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||| |||||||| || | ||| ||||| || | || | || || || |||||| Sbjct 118697 ATAACTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAA 118638 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 ||||| | | || |||| ||||||||||| ||||||||||||| || ||||| || Sbjct 118637 TCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCG 118578 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 || || ||||| || || ||||| || ||| |||||||| |||||||| | | Sbjct 118577 GGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGT 118518 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || || ||||||||||| || | |||||| | ||||| |||||||| Sbjct 118517 TCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 118462 >seq56 Length=83948 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171858 AATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCA 171917 || || ||||| ||||||| |||||| |||||| || ||||| | || || |||| Sbjct 38175 AACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCT 38116 Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 || | ||| |||||||||||||| | || ||||| |||||||| ||||| || ||||| Sbjct 38115 TCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCC 38056 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || || ||| || ||||| |||||||| | |||||||| | || |||||| Sbjct 38055 TGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTT 37996 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || | |||||| | ||||| ||||| Sbjct 37995 TTACCCGTGAGTGTTTTCACAAATATTTGCAT 37964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134416012000