Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq120 84.2 3e-11 >seq120 Length=285418 Score = 84.2 bits (92), Expect = 3e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 171677 TTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTT-ACTGAAAGAAAA 171735 ||||| | | |||||| || | |||||||| ||| || |||| | | |||| |||| Sbjct 219456 TTTGGGAAAAGAATGGTACTAGAGAATTTTTGGATAG-TGTGGGTCTGAATGAACGAAAG 219514 Query 171736 GAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATC 171795 ||| ||| ||||||| || || || || |||||||||||| |||||| |||||| Sbjct 219515 GAACACGATCTAGGTCCCATATACGGCTTCCAATGGAGACATTTTGGGGCTGAATATAAA 219574 Query 171796 GACTGTTATACAGATTACAC 171815 || || ||||| ||||||| Sbjct 219575 GATTGCGATACAAATTACAC 219594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530100070400