Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq56 111 2e-19 seq65 105 7e-18 >seq56 Length=83948 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || ||||| | ||| || ||||| | ||||| |||||||| || ||||| || | Sbjct 38190 CCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGAC 38131 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||| ||||| ||||||||| | ||||| ||||| ||||| || || Sbjct 38130 AGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGA 38071 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || || || ||| || || | | ||| | || || |||| |||||| Sbjct 38070 ATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACT 38011 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAG 137413 || | || | || || || || | |||||| || ||||||||||||| Sbjct 38010 TCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCATAG 37962 >seq65 Length=192560 Score = 105 bits (116), Expect = 7e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GT 137257 || ||||| |||| || ||||| ||||||||||| ||||| | | ||| ||| || Sbjct 118676 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATC--TGAAAGTGTACGACCGT 118619 Query 137258 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 137317 | || | |||||| |||||| | || || ||||| |||||||| || || || || |||| Sbjct 118618 CCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGT 118559 Query 137318 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCG 137377 | ||| || |||| | ||| | || || | ||||| || |||| || | | Sbjct 118558 CTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGG 118499 Query 137378 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || || || | ||||||||| ||||||||||| Sbjct 118498 TTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 118465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543145048000