Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq125 205 2e-47 seq37 205 2e-47 seq33 205 2e-47 seq32 205 2e-47 >seq125 Length=210264 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Plus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 50352 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 50411 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 50412 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 50471 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 50472 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 50531 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 50532 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 50587 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 50588 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 50647 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 50648 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 50707 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 50708 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 50767 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 50768 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 50827 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 50828 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 50887 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 50888 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 50947 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 50948 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 51007 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 51008 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 51047 >seq37 Length=216676 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 83804 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 83745 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 83744 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 83685 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 83684 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 83625 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 83624 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 83569 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 83568 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 83509 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 83508 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 83449 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 83448 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 83389 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 83388 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 83329 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 83328 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 83269 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 83268 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 83209 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 83208 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 83149 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 83148 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 83109 >seq33 Length=143971 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Plus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 50352 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 50411 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 50412 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 50471 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 50472 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 50531 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 50532 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 50587 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 50588 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 50647 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 50648 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 50707 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 50708 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 50767 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 50768 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 50827 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 50828 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 50887 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 50888 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 50947 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 50948 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 51007 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 51008 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 51047 >seq32 Length=149697 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Plus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 65894 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 65953 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 65954 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 66013 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 66014 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 66073 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 66074 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 66129 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 66130 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 66189 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 66190 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 66249 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 66250 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 66309 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 66310 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 66369 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 66370 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 66429 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 66430 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 66489 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 66490 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 66549 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 66550 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 66589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810671154540