Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq120 93.3 4e-14 seq81 91.5 1e-13 >seq120 Length=285418 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 39777 GGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAAT 39836 |||||| ||||||||||||| ||| |||||| ||||||||||||||||||| |||| || Sbjct 221998 GGCGGGCATGGTCTAGTGGTGATGACGTCTGCCTTACACGCAGAAGGTCCCGAGTTCGAT 222057 Query 39837 CCCCGGTGCCCGTA 39850 || |||||| |||| Sbjct 222058 CCTCGGTGCTCGTA 222071 >seq81 Length=103707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 39777 GGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAAT 39836 |||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| || Sbjct 103044 GGCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGAT 103103 Query 39837 CCCCGGTGCCCGTAT 39851 || |||||||||||| Sbjct 103104 CCTCGGTGCCCGTAT 103118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39776 AGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAA 39835 |||| || ||||||||||||||||| || ||| || |||||||| |||||||| |||| | Sbjct 102657 AGGCAGGCATGGTCTAGTGGTTATGACGCCTGCTTCACACGCAGGAGGTCCCGAGTTCGA 102716 Query 39836 TCCCCGGTGCCCGTAT 39851 ||| ||||||| |||| Sbjct 102717 TCCTCGGTGCCTGTAT 102732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466123984281600