Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq65 111 2e-19 seq125 86.0 6e-12 seq37 86.0 6e-12 seq33 86.0 6e-12 seq32 86.0 6e-12 >seq65 Length=192560 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| ||||| || | ||||| | ||| ||||| ||||||||||| ||||| || || Sbjct 118692 TCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGA 118633 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || || ||| || | ||||| || |||||||| | || || |||||||| || Sbjct 118632 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 118573 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || |||||||| || || || || | || || | |||||| Sbjct 118572 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 118513 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||||||||| || | ||||| || || ||||||||||| Sbjct 118512 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 118462 >seq125 Length=210264 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 9090 TAAAGAG-CTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTG 9148 |||||| ||||| |||||||| ||||| || || || | || | || | |||||| | Sbjct 51883 TAAAGAATCTGTACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAG 51942 Query 9149 CGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA 9208 | ||| | ||||| || ||||| ||| |||||| | ||| | | | | | || | Sbjct 51943 CCGATCGCGGCGCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTA 52002 Query 9209 CTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCA 9268 | || || | |||| || || || | || ||||| | || ||||||| || Sbjct 52003 CATATGCCAAGTTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAG 52062 Query 9269 TGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 | || ||||||||||| ||||||| || || | ||||| |||||||| Sbjct 52063 TATATTATTTGCGCACCCAACCCGCTGCCGATGCCATCAAGTTTACAGT 52111 >seq37 Length=216676 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 9090 TAAAGAG-CTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTG 9148 |||||| ||||| |||||||| ||||| || || || | || | || | |||||| | Sbjct 82273 TAAAGAATCTGTACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAG 82214 Query 9149 CGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA 9208 | ||| | ||||| || ||||| ||| |||||| | ||| | | | | | || | Sbjct 82213 CCGATCGCGGCGCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTA 82154 Query 9209 CTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCA 9268 | || || | |||| || || || | || ||||| | || ||||||| || Sbjct 82153 CATATGCCAAGTTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAG 82094 Query 9269 TGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 | || ||||||||||| ||||||| || || | ||||| |||||||| Sbjct 82093 TATATTATTTGCGCACCCAACCCGCTGCCGATGCCATCAAGTTTACAGT 82045 >seq33 Length=143971 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 9090 TAAAGAG-CTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTG 9148 |||||| ||||| |||||||| ||||| || || || | || | || | |||||| | Sbjct 51883 TAAAGAATCTGTACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAG 51942 Query 9149 CGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA 9208 | ||| | ||||| || ||||| ||| |||||| | ||| | | | | | || | Sbjct 51943 CCGATCGCGGCGCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTA 52002 Query 9209 CTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCA 9268 | || || | |||| || || || | || ||||| | || ||||||| || Sbjct 52003 CATATGCCAAGTTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAG 52062 Query 9269 TGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 | || ||||||||||| ||||||| || || | ||||| |||||||| Sbjct 52063 TATATTATTTGCGCACCCAACCCGCTGCCGATGCCATCAAGTTTACAGT 52111 >seq32 Length=149697 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 9090 TAAAGAG-CTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTG 9148 |||||| ||||| |||||||| ||||| || || || | || | || | |||||| | Sbjct 67425 TAAAGAATCTGTACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAG 67484 Query 9149 CGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA 9208 | ||| | ||||| || ||||| ||| |||||| | ||| | | | | | || | Sbjct 67485 CCGATCGCGGCGCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTA 67544 Query 9209 CTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCA 9268 | || || | |||| || || || | || ||||| | || ||||||| || Sbjct 67545 CATATGCCAAGTTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAG 67604 Query 9269 TGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 | || ||||||||||| ||||||| || || | ||||| |||||||| Sbjct 67605 TATATTATTTGCGCACCCAACCCGCTGCCGATGCCATCAAGTTTACAGT 67653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397515552800