Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq125 95.1 1e-14 seq37 95.1 1e-14 seq33 95.1 1e-14 seq32 95.1 1e-14 seq92 86.0 7e-12 >seq125 Length=210264 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689 |||| ||||||||||| ||| ||||||| || || |||||||| |||||||||||| Sbjct 51894 TACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGC 51953 Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAG 20749 |||| ||| |||||||| || ||||| || | | |||||| | || | || ||| Sbjct 51954 GCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAG 52013 Query 20750 CTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTG 20809 || ||||| | || |||||| | || || || || || || | || ||| || Sbjct 52014 TTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTG 52073 Query 20810 CGGACCC 20816 || |||| Sbjct 52074 CGCACCC 52080 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 19424 CCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGC 19483 || |||||| | | ||||| | || || | || || | ||||| || || ||| | Sbjct 50578 CCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGA 50637 Query 19484 AAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAA 19543 || || || || ||||||||||| ||||||||||| || || | | || ||||| || Sbjct 50638 AAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGAT 50697 Query 19544 CTGCGCCTGAACCAGGGTGACGAGGAG--ATGCGCTGTCGCGACCTCTTCACGGCCTTGT 19601 || || ||||| ||| |||||| | | || | | ||| | ||| || |||| Sbjct 50698 CTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGC--TAGGGACTTGTTCTATGCATTGT 50755 Query 19602 GGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 |||| || ||||| |||||| | | |||||| Sbjct 50756 GGATCCCAGACCTTTTCATGAAAAGGGTTGA 50786 >seq37 Length=216676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689 |||| ||||||||||| ||| ||||||| || || |||||||| |||||||||||| Sbjct 82262 TACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGC 82203 Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAG 20749 |||| ||| |||||||| || ||||| || | | |||||| | || | || ||| Sbjct 82202 GCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAG 82143 Query 20750 CTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTG 20809 || ||||| | || |||||| | || || || || || || | || ||| || Sbjct 82142 TTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTG 82083 Query 20810 CGGACCC 20816 || |||| Sbjct 82082 CGCACCC 82076 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 19424 CCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGC 19483 || |||||| | | ||||| | || || | || || | ||||| || || ||| | Sbjct 83578 CCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGA 83519 Query 19484 AAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAA 19543 || || || || ||||||||||| ||||||||||| || || | | || ||||| || Sbjct 83518 AAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGAT 83459 Query 19544 CTGCGCCTGAACCAGGGTGACGAGGAG--ATGCGCTGTCGCGACCTCTTCACGGCCTTGT 19601 || || ||||| ||| |||||| | | || | | ||| | ||| || |||| Sbjct 83458 CTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGC--TAGGGACTTGTTCTATGCATTGT 83401 Query 19602 GGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 |||| || ||||| |||||| | | |||||| Sbjct 83400 GGATCCCAGACCTTTTCATGAAAAGGGTTGA 83370 >seq33 Length=143971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689 |||| ||||||||||| ||| ||||||| || || |||||||| |||||||||||| Sbjct 51894 TACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGC 51953 Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAG 20749 |||| ||| |||||||| || ||||| || | | |||||| | || | || ||| Sbjct 51954 GCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAG 52013 Query 20750 CTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTG 20809 || ||||| | || |||||| | || || || || || || | || ||| || Sbjct 52014 TTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTG 52073 Query 20810 CGGACCC 20816 || |||| Sbjct 52074 CGCACCC 52080 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 19424 CCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGC 19483 || |||||| | | ||||| | || || | || || | ||||| || || ||| | Sbjct 50578 CCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGA 50637 Query 19484 AAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAA 19543 || || || || ||||||||||| ||||||||||| || || | | || ||||| || Sbjct 50638 AAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGAT 50697 Query 19544 CTGCGCCTGAACCAGGGTGACGAGGAG--ATGCGCTGTCGCGACCTCTTCACGGCCTTGT 19601 || || ||||| ||| |||||| | | || | | ||| | ||| || |||| Sbjct 50698 CTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGC--TAGGGACTTGTTCTATGCATTGT 50755 Query 19602 GGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 |||| || ||||| |||||| | | |||||| Sbjct 50756 GGATCCCAGACCTTTTCATGAAAAGGGTTGA 50786 >seq32 Length=149697 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689 |||| ||||||||||| ||| ||||||| || || |||||||| |||||||||||| Sbjct 67436 TACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGC 67495 Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAG 20749 |||| ||| |||||||| || ||||| || | | |||||| | || | || ||| Sbjct 67496 GCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAG 67555 Query 20750 CTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTG 20809 || ||||| | || |||||| | || || || || || || | || ||| || Sbjct 67556 TTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTG 67615 Query 20810 CGGACCC 20816 || |||| Sbjct 67616 CGCACCC 67622 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 19424 CCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGC 19483 || |||||| | | ||||| | || || | || || | ||||| || || ||| | Sbjct 66120 CCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGA 66179 Query 19484 AAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAA 19543 || || || || ||||||||||| ||||||||||| || || | | || ||||| || Sbjct 66180 AAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGAT 66239 Query 19544 CTGCGCCTGAACCAGGGTGACGAGGAG--ATGCGCTGTCGCGACCTCTTCACGGCCTTGT 19601 || || ||||| ||| |||||| | | || | | ||| | ||| || |||| Sbjct 66240 CTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGC--TAGGGACTTGTTCTATGCATTGT 66297 Query 19602 GGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 |||| || ||||| |||||| | | |||||| Sbjct 66298 GGATCCCAGACCTTTTCATGAAAAGGGTTGA 66328 >seq92 Length=443471 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||||||||| || || || || ||||| || || || ||||| ||||| || || Sbjct 401875 GTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCATATTTTGGCTGAAAAAACGCGGG 401934 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 |||||||| || || | || |||||||| || || ||| |||||||||| || || Sbjct 401935 CTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCAGGGACGAGGGTCTACACGCC 401994 Query 60123 GAGTTTG 60129 ||||||| Sbjct 401995 GAGTTTG 402001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523840081600