Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq125 109 6e-19 seq37 109 6e-19 seq33 109 6e-19 seq32 109 6e-19 >seq125 Length=210264 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || || |||||||| ||||||| | ||||||||| || ||||| || || | | Sbjct 51900 ACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGCGCCTTC 51959 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGC 55864 || |||||||| || || |||||||| | |||||| | ||| || ||||||||| | Sbjct 51960 ATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAGTTGT-C 52018 Query 55865 TCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | | ||||||||||| || |||||||| ||||| || || || | || ||| |||| || Sbjct 52019 TAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTGCGCAC 52078 Query 55924 CC 55925 || Sbjct 52079 CC 52080 >seq37 Length=216676 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || || |||||||| ||||||| | ||||||||| || ||||| || || | | Sbjct 82256 ACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGCGCCTTC 82197 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGC 55864 || |||||||| || || |||||||| | |||||| | ||| || ||||||||| | Sbjct 82196 ATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAGTTGT-C 82138 Query 55865 TCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | | ||||||||||| || |||||||| ||||| || || || | || ||| |||| || Sbjct 82137 TAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTGCGCAC 82078 Query 55924 CC 55925 || Sbjct 82077 CC 82076 >seq33 Length=143971 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || || |||||||| ||||||| | ||||||||| || ||||| || || | | Sbjct 51900 ACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGCGCCTTC 51959 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGC 55864 || |||||||| || || |||||||| | |||||| | ||| || ||||||||| | Sbjct 51960 ATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAGTTGT-C 52018 Query 55865 TCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | | ||||||||||| || |||||||| ||||| || || || | || ||| |||| || Sbjct 52019 TAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTGCGCAC 52078 Query 55924 CC 55925 || Sbjct 52079 CC 52080 >seq32 Length=149697 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || || |||||||| ||||||| | ||||||||| || ||||| || || | | Sbjct 67442 ACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAGCCGATCGCGGCGCCTTC 67501 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGC 55864 || |||||||| || || |||||||| | |||||| | ||| || ||||||||| | Sbjct 67502 ATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTACATATGCCAAGTTGT-C 67560 Query 55865 TCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | | ||||||||||| || |||||||| ||||| || || || | || ||| |||| || Sbjct 67561 TAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAGTATATTATTTGCGCAC 67620 Query 55924 CC 55925 || Sbjct 67621 CC 67622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215042372000