Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq65 118 7e-22 seq56 113 3e-20 >seq65 Length=192560 Score = 118 bits (130), Expect = 7e-22 Identities = 172/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 23600 AATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAG 23659 || || | |||||||| || || || ||||| || ||||| ||||| || || || || | Sbjct 118454 AACTAGTAAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGG 118513 Query 23660 TTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTAC 23719 | || | | || ||| |||||| |||| || ||| ||||| || || | | Sbjct 118514 TGGAACCTAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTC 118573 Query 23720 CGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTT 23777 | || |||||||| || |||| ||||| || |||||| |||| |||| || |||||| Sbjct 118574 CCCCCGATCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTT 118633 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | |||| ||||||||||| || || || | || ||||| |||||| || |||| || Sbjct 118634 CAG--ATTATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 118691 Query 23838 A 23838 | Sbjct 118692 A 118692 >seq56 Length=83948 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| |||||||| ||||| ||||| | ||||| || ||| Sbjct 37964 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 38023 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| | |||| | || | || || || || || | || || ||||| Sbjct 38024 GATACTATCGAAAATGTTAAGGCTAAGA-TTCAGGATAAGGAGGGAATTCCACCTGATCA 38082 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | || ||||| || || ||||| ||||||| |||||| | || ||||| Sbjct 38083 ACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAA 38142 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||||||||| || || ||||| || || || || || || ||| Sbjct 38143 TATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGGA 38191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009023271120