Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq29 271 2e-67 >seq29 Length=96100 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Minus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 83461 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 83402 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 83401 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 83344 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 83343 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 83284 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 83283 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 83224 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 83223 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 83164 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 83163 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 83106 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 83105 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 83046 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 83045 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 82986 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 82985 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 82926 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 82925 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 82866 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 82865 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 82806 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 82805 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 82746 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 82745 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 82686 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 82685 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 82626 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 82625 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 82577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351412402442