Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq35 123 3e-23 >seq35 Length=66782 Score = 123 bits (136), Expect = 3e-23 Identities = 175/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | || || | ||| | |||||||| |||||| ||| ||| ||||| ||||||| Sbjct 28628 ATTAGTCTCCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGT 28687 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || |||||||| |||| || || ||||| || || || |||| || || || | Sbjct 28688 AGTCTGACAGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGAT 28747 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | | |||||| ||| ||||| ||| | | | | || || || | Sbjct 28748 CAGGTGGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGG 28807 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG- 46597 || || |||| ||||||||||| ||||| || ||||| ||||| |||||||| || Sbjct 28808 GCTCTACTTCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCATAGTGA 28867 Query 46598 CACAA 46602 ||||| Sbjct 28868 CACAA 28872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237474422120