Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq118 313 3e-80 seq125 147 3e-30 >seq118 Length=223543 Score = 313 bits (346), Expect = 3e-80 Identities = 1074/1661 (65%), Gaps = 40/1661 (2%) Strand=Plus/Plus Query 6508 TTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC---CTTTTTCGCGTA 6564 ||||||| |||||| ||||| || || ||||||| | || || | | ||| | Sbjct 81261 TTTCATTGAATAACAATAGTTCTCAAGTTCATTCTTGGATTCAACACACCTCTTC---TT 81317 Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||||||||| || || || |||| || || || |||||| | |||||||||| | Sbjct 81318 CTTTTCATCATCTTCCCTAAACTTCTCTGCTTCAGCAACCATCCTATCAATGTCTTGCTG 81377 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||| ||||| || || || | | ||| | || || | | ||| || Sbjct 81378 TGAAAGTCTTCCCTTGTCATTTGTTATAGTTACATGTTCAGTCTTTCCTGTCGACTTGTC 81437 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| || |||| |||||||| ||||| | || || | || ||||| || || Sbjct 81438 GGCAGCAGACACTGTCAATATACCATTGGCATCGATGTCAAAGGTGACTTTAATCTGGGG 81497 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || || || | || || || || |||| ||| | || |||||| |||| || Sbjct 81498 AACTCCTCTTGGAGCAGGAGGTATGCCAGTCAAATGGAATTTGCCTAGTAAATTGTTGTC 81557 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| |||| | || | ||| | | ||| |||| || Sbjct 81558 ACATGTCATAGAACGTTCTCCTTCGAAGACCTGGATCATAACCCCCGTTTGGTTATTTTC 81617 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| || |||||| ||||| | || || || |||||||| || || | | Sbjct 81618 ATTGGTTGTAAATTCTTGTTCCTTCTTGGCGGGGATAGTAGTATTTCTGGGTATCAGCAC 81677 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || || || ||||| || ||||| || || || || | |||| Sbjct 81678 GGTCATAACACCGCCGGCGGTCTCAAGTCCTAGTGACAGTGGAGTGACATCTA---GTAA 81734 Query 6985 CAGG---TCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 ||| ||||| || ||||| ||| || ||||| || || || || || Sbjct 81735 CAGTAAATCTTGGACCTTGCTAGATTG------TTCGCCAGTTAAAATTGCAGCCTGAAC 81788 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||| || || || || || || || |||||||| | ||| ||||||| || || Sbjct 81789 AGCCGCGCCATAGGCTACTGCTTCGTCTGGGTTAATTGATTTGCAGGGTTCTTTGCCATT 81848 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 ||| | ||| | || ||| || || || ||||| || ||||| || || || | || Sbjct 81849 GAAAAAGTCCTTAATCAATTGCTGTATCTTAGGGATACGGGTCGAACCTCCTACAAGTAC 81908 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTT 7214 | ||||| | | | ||||| || | || || | ||| | ||||||||| || Sbjct 81909 CACTTCATGGATCTGCTTCTTATCCATATCTGCATCAGCTAAG-GCTTTTTCGACTGGGA 81967 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | || ||||| || ||| || ||||| || | || | || ||| Sbjct 81968 TTAAAGTGTTTTTGAACATTTCGGCACAGAGCTCCTCGAATCTGGCCCTAGTGATGTTGC 82027 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | | | || | ||| || ||| | || | |||| || | |||| | | Sbjct 82028 AACTGTAGTCGATGCCATCAAATATAGCTTCTACAACAATCGTGGCCTGTGTTGAGTGGG 82087 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 |||| || || || || || ||||| |||| | | ||| | ||||| || Sbjct 82088 ATAAGGTGCGTTTAGCACGTTCACATTGTGTTCTAAGTCTACGTAATGCACGTCTATTGG 82147 Query 7395 CGGAAATATCTTTCTT---ATGTTTACGTTTAAACTCTTCAGAG-AAGTGTCGAAGGAGT 7450 ||||||| ||| || || || ||||| || || | || || || | | Sbjct 82148 TTGAAATATTCTTCCCGCCATTCTTTCGCTTAAAGTCATCTACGCAAAAGTTGACCAA-T 82206 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || || ||||| |||||||| ||||| || || || || || ||||| Sbjct 82207 CTGTTGTCAAAGTCCTCACCGCCCAAGTGGGTATCACCTTGTGTGGCCTTTACCTCAAAA 82266 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || |||| || |||| | || ||||| || || ||||| |||| || ||||| Sbjct 82267 ATGCCATCTTCGATAGTTAAAATTGATACATCGAAAGTGCCACCGCCCAAATCGAAAATC 82326 Query 7571 AGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | || || | || | || | ||||| || | ||| || || || || || || || Sbjct 82327 AACACATTTTTTTCAGAAGTACCT-TTCTTGTCCATACCATAGGCAATTGCGGCAGCAGT 82385 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| |||||||| | | || | |||||||| || | || || || || || Sbjct 82386 TGGTTCATTGATAATACGCATAACATTTAACCCAGCAATGGTACCAGCGTCCTTAGTGGC 82445 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| ||||||||||| || || || || || | || || | | || | |||| Sbjct 82446 CTGTCGTTGAGAATCGTTAAAATAAGCGGGTACAGTGATAACAGCATTAGAGATTGTCTT 82505 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| ||||| || || || ||||| ||||| || ||||| || || || || || Sbjct 82506 TCCCAAATAAGATTCTGCAATTTCCTTCATCTTGGTGAGGACCATAGAAGATATTTCCTC 82565 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || ||| |||||||| | ||| | || | |||| || ||||| | Sbjct 82566 TGGGTGGAAGGATTTAGTTTCACCCTGAAATTGTACCTTGATCACAGGCTTATCATTTGG 82625 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG--TCCGAA 7927 || | ||| || | | ||| | ||| ||||| ||||| || || || Sbjct 82626 TCCAGCCGCAACAGTAAATGGCCAGTGTTTTATATCACTTTGGA--TGCAGGGATCATTG 82683 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 | |||||| || || | | |||||||||||||||||||||| || || | || Sbjct 82684 ATCTTTCTCCCTATCAATCTTTTTGCATCAAAAACTGTGTTTTCAGGATTTCTAGCATCC 82743 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || ||||| || | | || || | || || || || || || || Sbjct 82744 TGATTTTTGGCGGCGTCGCCAACCAATCGCTCCACA---TCAGTGAAGGCAACATAAGAC 82800 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || || || || ||||| || || || ||||||||||| || |||| ||| ||| Sbjct 82801 GGAGTTGTACGGTTGCCTTGATCATTGGCTATAATTTCTACAGTTTCATTTTTCCAAACG 82860 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| |||||||| || || || Sbjct 82861 CCAACACATGAGTAAGTGGTTCCCAAATCAATCCCAATAGC 82901 >seq125 Length=98413 Score = 147 bits (162), Expect = 3e-30 Identities = 239/339 (71%), Gaps = 9/339 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||||||||| || | ||| ||||| || | |||||| |||||||||| | ||| Sbjct 87630 ATCAAAATCTTCACCGCCGAGGTGAGTATCTCCTGATGTCGCTATGACTTCAAATACACC 87689 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||| | | | ||||||||||| ||||||||||| || ||| | | | | Sbjct 87690 GTTGTCAATTGTAAGTAGGGAAACATCAAAAGTACCACCACCGAGATCATAGACCAAAAT 87749 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || || || || || ||||| || || ||||| || || || ||||| Sbjct 87750 ATTTTTTTCTTCATC---CTTATTGTCAAGACCATAAGCAATAGCAGCGGCTGTGGGTTC 87806 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 ||| | ||||| || ||| |||| |||||||| ||| | |||||||| || ||||| Sbjct 87807 ATTGAGTATACGTAATACA-TTCAAACCAGCAAT--TTGACCTGCATCTTTGGTAGCTTG 87863 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||| ||||| || || || || || || || || | | ||| ||| ||| Sbjct 87864 GCGCTGGGCATCATTAAAATATGCAGGAACTGTCACAACGGCATTTTTAACTGTCTGACC 87923 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 |||| | ||| || || |||||||||| ||| || Sbjct 87924 GAGAAAGTTTTCGGCCATGCTCTTCATTTTGGAAAGCAC 87962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131759970040