Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq29 131 9e-26 >seq29 Length=96100 Score = 131 bits (144), Expect = 9e-26 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | ||| || | ||||| ||||||| |||||| || || || || || || Sbjct 82892 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 82951 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || ||| || || || ||| |||||||| ||| ||||||||||| | |||||| Sbjct 82952 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 83011 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||||||||||||||| || || ||||| || || | Sbjct 83012 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 83071 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159 ||||| |||||||| | | | | ||| || | |||| ||| | ||| || ||||||| Sbjct 83072 GCAGTATCATTGAATATTCTGAGCATAGGTA-TAATCCCATTGGAATGCCCATTTGTGC 83129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039596005825