Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq118 517 1e-141 seq125 199 5e-46 seq67 163 4e-35 seq35 161 1e-34 seq53 120 4e-22 >seq118 Length=223543 Score = 517 bits (572), Expect = 1e-141 Identities = 1078/1591 (68%), Gaps = 25/1591 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || ||||| ||||| ||||||||||||||||| || ||| ||||||| | Sbjct 82901 GCTATTGGGATTGATTTGGGAACCACTTACTCATGTGTTGGCGTTTGGAAAAATGAAACT 82842 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 ||||| ||||| | ||||| ||||| |||||||||||||| || || |||||||| || Sbjct 82841 GTAGAAATTATAGCCAATGATCAAGGCAACCGTACAACTCCGTCTTATGTTGCCTTCACT 82782 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 ||| || || | ||||| || ||||| ||||||||| |||| || ||| || Sbjct 82781 GATGTGGAGCGATTGGTTGGCGACGCCGCCAAAAATCAGGATGCTAGAAATCCTGAAAAC 82722 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || ||||| || || | | || || | ||| | ||| ||||| Sbjct 82721 ACAGTTTTTGATGCAAAAAGATTGATAGGGAGAAAGATCAATGATCCCTGCATCCAAAGT 82662 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 |||||||| ||||| | | | |||| | || |||||||||| |||| || Sbjct 82661 GATATAAAACACTGGCCATTTACTGTTGCGGCTGGACCAAATGATAAGCCTGTGATCAAG 82602 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || ||||||| ||||| | ||| || || || ||||| || |||||||| | Sbjct 82601 GTACAATTTCAGGGTGAAACTAAATCCTTCCACCCAGAGGAAATATCTTCTATGGTCCTC 82542 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 | ||||||||||| | ||| ||||||| |||| || || | |||| ||| | Sbjct 82541 ACCAAGATGAAGGAAATTGCAGAATCTTATTTGGGAAAGACAATCTCTAATGCTGTTATC 82482 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 |||||||| ||||| || | ||||| ||||||||||| || |||||||||| | | ||| Sbjct 82481 ACTGTACCCGCTTATTTTAACGATTCTCAACGACAGGCCACTAAGGACGCTGGTACCATT 82422 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || |||| | | | ||||||||||||||||| || || |||||||| |||||| Sbjct 82421 GCTGGGTTAAATGTTATGCGTATTATCAATGAACCAACTGCTGCCGCAATTGCCTATGGT 82362 Query 195839 CTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 |||||||||| | | || || |||||||| ||||| || ||| | || ||||| || Sbjct 82361 ATGGACAAGAA-AGGTACTTCTGAAAAAAATGTGTTGATTTTCGATTTGGGCGGTGGCAC 82303 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 || ||||| ||| || | | ||| |||| ||| || || || |||||||| || || Sbjct 82302 TTTCGATGTATCAATTTTAACTATCGAAGATGGCATTTTTGAGGTAAAGGCCACACAAGG 82243 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT-GATG 196016 |||||| || | || ||||| || || || || || | | |||| | |||| Sbjct 82242 TGATACCCACTTGGGCGGTGAGGACTTTGA-CAACAGATTGGTCAACTTTTGCGTAGATG 82184 Query 196017 AGTTCCGTCGAAAGAAT---AAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | || ||||||||| ||| ||||||| ||| | || | ||| | | Sbjct 82183 ACTTTAAGCGAAAGAATGGCGGGAAGAATATTTCAACCAATAGACGTGCATTACGTAGAC 82124 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA-ACA----AT 196128 |||| || |||||||||||| ||||| || ||| | | ||||| ||| | Sbjct 82123 TTAGAACACAATGTGAACGTGCTAAACGCAC-----CTTATCCCACTCAACACAGGCCAC 82069 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC-TATACAACTATTACCCGTGCAC 196187 | ||| | || | | ||||| || || |||| | | |||| || || | || Sbjct 82068 GATTGTTGTAGAAGCTATATTTGATGGCATCGACTACAGTTGCAAC-ATCACTAGGGCCA 82010 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | || || ||| | | || |||| | || | | || || ||| ||| | Sbjct 82009 GATTCGAGGAGCTCTGTGCCGAAATGTTCAAAAACACTTTAATCCCAGTCGAAAAAG-CC 81951 Query 196248 TTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || | ||| ||| | ||||||||| || | ||||| | || ||||| ||||| || Sbjct 81950 TTAGCTGATGCAGATATGGATAAGAAGCAGATCCATGAAGTGGTACTTGTAGGAGGTTCG 81891 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || ||||| || || || || ||| |||||| ||||| | Sbjct 81890 ACCCGTATCCCTAAGATACAGCAATTGATTAAGGACTTTTTCAATGGCAAAGAACCCTGC 81831 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 ||| | || ||||| || |||||||| || ||||| ||||| ||||||||||| ||| | Sbjct 81830 AAATCAATTAACCCAGACGAAGCAGTAGCCTATGGCGCGGCTGTTCAGGCTGCAATTTTA 81771 Query 196427 TCAGGTGTTGACAA--TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 | || | |||| || || ||||||||| | ||| |||| ||||| | || | | Sbjct 81770 ACTGGCG--AACAATCTAGCAAGGTCCAAGATTTACTGTTACTAGATGTCACTCCACTGT 81713 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | || || ||||| || || || ||||||||||| | || || || || |||| Sbjct 81712 CACTAGGACTTGAGACCGCCGGCGGTGTTATGACCGTGCTGATACCCAGAAATACTACTA 81653 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 | || | ||||||||||||| ||| |||| || |||| ||| | || ||| | Sbjct 81652 TCCCCGCCAAGAAGGAACAAGAATTTACAACCAATGAAAATAACCAAACGGGGGTTATGA 81593 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCG 196664 | || || | ||||||||||| || || || ||| || |||| || | ||| Sbjct 81592 TCCAGGTCTTCGAAGGAGAACGTTCTATGACATGTGACAACAATTTACTAGGCAAATTCC 81533 Query 196665 ATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATA 196724 ||||||| || || || |||| || ||||| ||||| |||||||| || ||| || | Sbjct 81532 ATTTGACTGGCATACCTCCTGCTCCAAGAGGAGTTCCCCAGATTAAAGTCACCTTTGACA 81473 Query 196725 TAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAA 196784 | || || ||||| || | | || | |||| |||||| | | || || ||||| Sbjct 81472 TCGATGCCAATGGTATATTGACAGTGTCTGCTGCCGACAAGTCGACAGGAAAGACTGAAC 81413 Query 196785 AGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTC 196844 | | || || ||||||||||| | ||||| || | || ||||| | |||||| Sbjct 81412 ATGTAACTATAACAAATGACAAGGGAAGACTTTCACAGCAAGACATTGATAGGATGGTTG 81353 Query 196845 AAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 || || || |||| |||||||| || || Sbjct 81352 CTGAAGCAGAGAAGTTTAGGGAAGATGATGA 81322 >seq125 Length=98413 Score = 199 bits (220), Expect = 5e-46 Identities = 234/312 (75%), Gaps = 6/312 (2%) Strand=Plus/Minus Query 195678 CGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCA 195737 || || ||||| | ||| | || || ||| |||| |||||||| || ||||| || || | Sbjct 87936 CGAAAACTTTC-TCGGTCAGACAGTTAAAAATGCCGTTGTGACAGTTCCTGCATATTTTA 87878 Query 195738 GTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA 195797 |||| | || || || || || || || || | | ||||| ||| | || ||| ||| Sbjct 87877 ATGATGCCCAGCGCCAAGCTACCAAAGATGCAGGTCAAATTGCTGGTTTGAA-TGTATTA 87819 Query 195798 -GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGAC 195856 | || |||||||||| ||||| ||||| |||||||||||||| ||||| || ||| Sbjct 87818 CGTATACTCAATGAACCCACAGCCGCTGCTATTGCTTATGGTCTTGACAATAA---GGAT 87762 Query 195857 GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTC 195916 ||||| |||||| | ||| ||| |||||||||||||||||| |||||||| || || || Sbjct 87761 GAAGAAAAAAATATTTTGGTCTATGATCTCGGTGGTGGTACTTTTGATGTTTCCCTACTT 87702 Query 195917 AATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGT 195976 | ||||| ||| |||| ||||| | || || | || |||||||| || || ||| Sbjct 87701 ACAATTGACAACGGTGTATTTGAAGTCATAGCGACATCAGGAGATACTCACCTCGGCGGT 87642 Query 195977 GAAGATTTCGAT 195988 |||||||| ||| Sbjct 87641 GAAGATTTTGAT 87630 >seq67 Length=197426 Score = 163 bits (180), Expect = 4e-35 Identities = 179/237 (76%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 171853 ACTAGTAGTA-TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGT 171911 ||||||| | ||||||| ||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 118453 ACTAGTAAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGT 118512 Query 171912 TGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCC 171971 || | || || || || || | || || ||||||||||| ||||| || ||||| Sbjct 118513 GGAACCTAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCC 118572 Query 171972 ACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGC 172031 |||||||| |||||||| ||||||||||| ||||| | || || || ||||| || | Sbjct 118573 CCCCGATCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTC 118632 Query 172032 TGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||| | |||||||| || || || ||| | || ||||||| | ||||| Sbjct 118633 AGATTATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 118689 >seq35 Length=66782 Score = 161 bits (178), Expect = 1e-34 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 ||||||||| ||||||||||| || || || ||||| ||||| | || || ||| | Sbjct 28863 TATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAG 28804 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || || ||||| || | || || |||||||| |||||||| || |||||||| ||||| Sbjct 28803 TGATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCA 28744 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 |||||||| |||||||||||||| || || ||||| || || || || | || ||||| Sbjct 28743 ACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAA 28684 Query 172041 CGTTCAAAAGGAGTCTACT 172059 ||||||| ||||||||| Sbjct 28683 TATTCAAAAAGAGTCTACT 28665 >seq53 Length=81331 Score = 120 bits (132), Expect = 4e-22 Identities = 229/331 (69%), Gaps = 16/331 (5%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || |||||||| || || ||| || | |||||| | |||||| | | ||||| | || Sbjct 40084 AAAATGAAGGAAACAGCAGAAGCTCACTTGGGTAGACCTGTGAGAAAAGCAGTGATAACG 40025 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 ||||| ||||| || | ||||||||| |||||||||||||||| || | | || || Sbjct 40024 GTACCCGCTTATTTTAACGATTCACAAAGACAGGCGACAAAGGATGCGGGTAAGATCGCA 39965 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | | | || || || || |||||||| || ||||| |||| | |||| || Sbjct 39964 GGTCTTGAAGTTTTGAGGATAATTAACGAACCAACGGCAGCTGCGCTTGCCTTTGGTTTG 39905 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACGT 195899 || |||| | || | ||||| |||| | | |||| | || ||||| || | Sbjct 39904 GAGAAGA------ATGATGGTAAAA--CAATTGCAGTATATGATTTGGGCGGTGGCACCT 39853 Query 195900 TTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 | ||| |||| | || |||||| || ||| | || |||||||| || ||| ||| Sbjct 39852 TCGATATCTCTATCCTGGAGATATTG--GGCGGTGTGTTTGAAGTAAAAGCAACTAATGG 39795 Query 195958 TGATAC-TCATCTAGGTGGTGAAGATTTCGA 195987 | || |||| | || || ||||| || || Sbjct 39794 AAACACTTCAT-TGGGGGGCGAAGACTTTGA 39765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861322750320