Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq67 129 5e-25 seq35 109 5e-19 >seq67 Length=197426 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||||||||| ||||| | || || |||||||| ||| | || ||| ||| Sbjct 118460 AAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCT 118519 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||||| | | | ||||| |||||| ||||| || || | ||| ||| Sbjct 118520 AGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGAT 118579 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| |||| |||| ||| || ||||| ||||||| | | ||| | | ||||| Sbjct 118580 CAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTAT 118639 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| ||||| ||||| ||| | ||| | |||||||| ||| |||| ||| Sbjct 118640 AACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGA 118690 >seq35 Length=66782 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| ||||| | || || |||||||| || | ||| ||||| Sbjct 28862 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 28803 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | || || |||||| || || || || | || |||||| Sbjct 28802 GATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAA 28743 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| |||| |||| ||| ||||| || || || || | | | || || | || ||||| Sbjct 28742 CAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAAT 28683 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||||||||| ||||| ||||| ||||||| ||| | || || ||| Sbjct 28682 ATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGGA 28635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840940872583