Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq29 205 2e-47 >seq29 Length=96100 Score = 205 bits (226), Expect = 2e-47 Identities = 468/700 (67%), Gaps = 11/700 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||| || || ||||| || || || ||| | |||||||| ||| || || || Sbjct 83326 TATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTG 83267 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| ||||| | ||||| |||||||||||| ||||||| ||| | |||| || Sbjct 83266 CTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATG 83207 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTC 110641 ||| || ||| ||| | | ||||| || ||| | | || | || || ||| Sbjct 83206 TGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATACACAAAATACGTGCCTC 83147 Query 110642 AAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 | | || | || ||| || | || || ||| | ||| || | || ||| | | Sbjct 83146 CA---GTTCATACATTCGCGGCA-CAAATGGGCATTCCAATGGGATTATACCTATGCTCA 83091 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCA---AGGTGGTAAGAGAAATGGCTCAT 110757 || | ||||| || ||||| ||||| |||| ||| || || ||||| || |||| Sbjct 83090 GAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCAT 83031 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| || || || |||||| | ||||| ||||||||| |||| || || |||| Sbjct 83030 TTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAA 82971 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || | || || ||| || | || || || |||||| ||||||| |||| Sbjct 82970 ACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACC 82911 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 | ||||||||| | ||| ||| |||| | ||| || | ||||| || || | | Sbjct 82910 TTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGTGCCCAGATGAGTGTA 82851 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 || ||| | | || | ||| | || |||||| | | ||| | ||||| Sbjct 82850 GAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACACTAGTTATGAGTCGA 82791 Query 110998 AAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCAC 111057 |||||| | ||||||| | |||| || ||| |||||||| ||| | |||| | Sbjct 82790 AAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTGCTATCTTACAATCGC 82731 Query 111058 AAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATC 111117 || ||||||| ||||||||||| || || || || || | |||| ||| || |||| Sbjct 82730 AAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTAATTACAAGTCAAATC 82671 Query 111118 AAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTG 111157 | | ||| |||| || ||||||||||| || || ||||| Sbjct 82670 AGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTG 82631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810808008891