Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_002661.2 Length=42942 Score E Sequences producing significant alignments: (Bits) Value seq11 100 8e-17 >seq11 Length=2611 Score = 100 bits (110), Expect = 8e-17 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 30347 ATCTGGCAAAGATTTGGACGCTACACAGGTGGACTTAACTTTAATGGCGGTCGTCACTAT 30406 || ||||| | ||| || |||||| |||||| | ||||| || ||| |||||| Sbjct 1724 ATTTGGCAGAAATTCGGTAACTACACTGGTGGATTAGGATTTAACGGTGGTAAACACTAT 1665 Query 30407 GGTATAGACTTTGGTATGCCTTCTGGAACAAACGTTTATGCCGTTAAAGGTGGTATAGCA 30466 ||| | |||||||| ||| | || ||||||||| | || ||| || |||| || | Sbjct 1664 GGTGTGGACTTTGGCATGATGCCAGGTACAAACGTTAAAGCTGTTGCTGGAGGTAAAGTA 1605 Query 30467 GATAAGGTATGGACTGATTACGGTGGCGGTAATTCTATACAAATTAAGACTGGTGCTAAT 30526 || ||||||| ||| || || |||||||| ||||| || || | | ||| || Sbjct 1604 TCAAAAGTATGGAATGACTATGGCGGCGGTAAATCTATTGAAGTTGATATAGGTA--AAG 1547 Query 30527 GAATGG--AACTGGTATATGCATTTATCTAAGCAATTAGCAAGACAAGGCCAA 30577 || | |||||||||||||| ||| || ||||||| || |||||||| Sbjct 1546 GATTAACTAACTGGTATATGCACTTAAGCAAACAATTAGTTAGTAAAGGCCAA 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137292586423888