Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq130 100 2e-16 >seq130 Length=171689 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 140720 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAA 140779 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| |||| |||| ||||||||| || || || | || ||||| ||||| || Sbjct 140780 AGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGA 140839 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| ||| || ||| || | | | || | | |||||| Sbjct 140840 ATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACC 140899 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | ||| || || || ||||| || || || ||||| |||||||| || Sbjct 140900 TCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 140949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074569237751