Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq44 168 8e-37 seq82 98.7 1e-15 >seq44 Length=96109 Score = 168 bits (186), Expect = 8e-37 Identities = 692/1074 (64%), Gaps = 44/1074 (4%) Strand=Plus/Plus Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||| |||||||| || | ||| | || | || ||| | ||||| ||||| Sbjct 82306 TAAATTGTTTCAAAAATTCTGACATTCAATTCACGGGCCTCCTGAGATTCAAAAGGATAG 82365 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | || || || | || |||||||| ||||| || | ||| || || ||||||||| Sbjct 82366 CGCATAAGCATGAAAGTATCAGCTAATCCCTGAACTCCTACACCTATTGGCCTATGTCTC 82425 Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867 || ||||| |||||| || |||| ||| |||||||| ||||||||| |||| | | Sbjct 82426 TTGTTAGAATATTCAGCCTCAGGAACAGGGTAATAATTCTCGTCTATAATTCTATTCAAA 82485 Query 62868 TTTCTGACAATTACTTTG--ACCACATCCT--TCAGTTTGAGAAAATCAAATCGCCCA-- 62921 || || || ||| | || | | | | || ||| |||||| | Sbjct 82486 TTGAAAGTAAGTATCTTGCAAGCAGAATGTAATAACTT----AAAGTCAAATTCGAGAGT 82541 Query 62922 TCTA----TTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATT 62977 | || ||||| || | |||||| | || || || |||||||| || || ||||| Sbjct 82542 TTTAGTGTTTACATACTTTGGCAATGCTAGTGAAGCGAGGTTACACACTGCAACTTCATT 82601 Query 62978 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 63037 || | | |||||| | ||||| ||| | || ||| |||| ||||| |||| || Sbjct 82602 AGGAGATGTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTT 82661 Query 63038 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63097 | ||||| ||| | ||||| || ||||| || | ||| | ||||| || ||||| Sbjct 82662 CTTCTGATTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTC 82721 Query 63098 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT 63157 ||| || |||| || || || ||| | | | | || | | | |||| | Sbjct 82722 AATTTGCGATTGTAAGATAGCAAACCAAAGGGTTTGCGCGGGAACTGT---TTTGCGAC- 82777 Query 63158 CCTTTCTCTTTCGT---ATAG--AGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63212 || | | |||||| ||| ||| || ||| ||| || || ||||||||||| | Sbjct 82778 CCATGC-CTTTCGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGA 82836 Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 63272 || | || ||| ||||| || |||||||| | ||| | | | | | | | || | | Sbjct 82837 TCTAGTCCTCTACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTT 82896 Query 63273 TTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTC 63331 ||||| || || || || ||||| | || ||| || | || || | || ||||| Sbjct 82897 TTCATGAAAAGGTCTGGGATCCACAATGC-ATAGAACAAGTCCCTAGCCCTTGACTCCTC 82955 Query 63332 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63391 || || ||| ||||| ||||| | | |||||||| |||||| || || | Sbjct 82956 TGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAG 83015 Query 63392 GTATATGGCCATAACTCCAGGCCGTTTGTTT-----CCTCCCTGATCTATGTATCTAGCG 63446 ||| ||||| || | | || ||| ||| ||||||||||| | || | ||| Sbjct 83016 GTAGATGGC---AAATGAA--CCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCA 83070 Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506 || | ||| | | ||| | ||| || ||||| || || || ||||| || ||| Sbjct 83071 GTATCATTGAATATTCTGAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGA 83130 Query 63507 ATATAGCCTCCACTGG---CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63563 || || | ||||| |||| || || |||| || |||||| || ||||| | Sbjct 83131 ATGTA---TGAACTGGAGGCACGTATTTTGTGTATTGCTAAACCTATCCCTCCTGCTGTC 83187 Query 63564 TTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATC 63623 ||| || | ||| ||| | | | |||||| | || || || |||||| | Sbjct 83188 TTACTAATGAGTGCACATTGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTA 83247 Query 63624 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTA 63683 || | ||| || || |||||||||||||| || ||||||| | || || | || Sbjct 83248 ATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTG 83307 Query 63684 GGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGC 63736 |||| ||||| |||| |||| | || | ||| |||||| ||||| || || Sbjct 83308 GGAGTGGCGTGGATAAATAATTTCTTGGACATGTA-ATTGTAAGTCTCCATGGC 83360 >seq82 Length=91553 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 |||| ||||| | || ||| ||| ||||||||||| || |||| |||||| |||| Sbjct 50092 ACATATAACATCCAAACTCGGCGTGTAGACCCTCGTCCCTGGAGATTAGTTCGTTGGAAA 50033 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | || || |||||||| || || || ||||| ||||||||||||| ||| || | Sbjct 50032 AGGTTAGCCCGGGCATGAGCCCGCGTTTTTTCAGCCAAAATATGGCGCAGAAGCTACCCG 49973 Query 33694 AAAAGAAGATTCCTTCTACTGC 33715 |||| || |||||||| ||||| Sbjct 49972 AAAATAAAATTCCTTCCACTGC 49951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816568673680