Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq44 143 2e-29 >seq44 Length=96109 Score = 143 bits (158), Expect = 2e-29 Identities = 406/621 (65%), Gaps = 2/621 (0%) Strand=Plus/Plus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||||||| | ||| || | ||||| || | || |||| ||| || ||| ||| Sbjct 82804 TATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACACTCATCTGGGCAC 82863 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | || ||| | ||||| ||| || | || ||| || | || || | ||| ||| Sbjct 82864 ATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTCTGGGATCCACAAT 82923 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || || || | | || | || || || || |||| || ||| Sbjct 82924 GCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGG 82983 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || |||||||| |||||||| |||| || || | | || ||| |||||| Sbjct 82984 AATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTT 83043 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || ||| | | | || | ||| ||||||| | |||||||| || Sbjct 83044 CCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAGCATAGGTATAATC 83103 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || ||| | ||| || || | || || ||||| || ||| Sbjct 83104 CCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGAGGCACGTATTTTGTGTATT 83163 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAA-GCGCATTGTTTTAACGTATCAAA 38348 | || ||||| || ||||| ||| || || | | || ||||| | | || ||||| Sbjct 83164 GCTAAACCTATCCCTCCTGC-TGTCTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAA 83222 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 ||||| ||| |||||||| || || | || || |||||||||||||| || Sbjct 83223 AATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAA 83282 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | |||||| | ||| || | ||| |||| || || || || |||| | |||| || Sbjct 83283 TTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAATAATTTCTTGGACATGTA 83342 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||| || || || || || ||| |||||| | ||| ||||| || || || | Sbjct 83343 ATTGTAAGTCTCCATGGCACGATCAATATCATTGGAGTGTATACCGCAAGCAACTCTGAC 83402 Query 38529 TAGCATATGTTGTGGTCTTTC 38549 || | ||| || || ||||| Sbjct 83403 GAGAAGATGCTGAGGCCTTTC 83423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524032790640