Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq11 100 8e-17 >seq11 Length=2611 Score = 100 bits (110), Expect = 8e-17 Identities = 204/299 (68%), Gaps = 13/299 (4%) Strand=Plus/Minus Query 13542 AAATCGTGGTTTGAAGATTTTG---GTGGCGGAGGCGA---TGGAAGCTATCTATTTGAC 13595 ||||| ||||||||||| | |||||| ||| || |||| | | | || | Sbjct 1787 AAATCTTGGTTTGAAGAAGCAGAAGGTGGCGAAGGTGACGCTGGATGGT---TGTTAAAA 1731 Query 13596 CATCCAATTTGGCAAAGGTTTGGGAGTTACACAGGTGGACTTAACTTTAATGGCGGTCGT 13655 ||| |||||||| | || || | ||||| |||||| | ||||| || ||| Sbjct 1730 CATGATATTTGGCAGAAATTCGGTAACTACACTGGTGGATTAGGATTTAACGGTGGTAAA 1671 Query 13656 CACTATGGTATCGACTTTGGTATGCCTACAGGAACGAACATTTATGCTGTTAAAGGCGGT 13715 ||||||||| | |||||||| ||| |||| || ||| || | |||||| || ||| Sbjct 1670 CACTATGGTGTGGACTTTGGCATGATGCCAGGTACAAACGTTAAAGCTGTTGCTGGAGGT 1611 Query 13716 ATAGCTGATAAAGTATGGACTGATTACGGTGGCGGTAATTCTATACAAATTAAGACCGGT 13775 | || |||||||||| ||| || || |||||||| ||||| || || | | ||| Sbjct 1610 AAAGTATCAAAAGTATGGAATGACTATGGCGGCGGTAAATCTATTGAAGTTGATATAGGT 1551 Query 13776 GCTAACGAATGG--AACTGGTATATGCATTTATCTAAGCAATTAGCAAGACAAGGCCAA 13832 || || | |||||||||||||| ||| || ||||||| || |||||||| Sbjct 1550 A--AAGGATTAACTAACTGGTATATGCACTTAAGCAAACAATTAGTTAGTAAAGGCCAA 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146633371893106