Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq44 93.3 4e-14 >seq44 Length=96109 Score = 93.3 bits (102), Expect = 4e-14 Identities = 182/268 (68%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 94055 TACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTA 94114 |||||||| |||| ||||| ||||| || ||||| ||||| || | | |||| Sbjct 83152 TACGTGCCTCCAGTTCATACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTA 83093 Query 94115 TGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGG 94174 ||||| | | ||||| | | || || || || || ||||| || || | || || | Sbjct 83092 TGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAG 83033 Query 94175 GTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGC 94234 |||| || || |||| || ||||| ||||| || || | | ||| | || || | Sbjct 83032 GTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTAC 82973 Query 94235 GAAAGAACCACGGCAACGATCTGGAG---AGGGCCAGAGACCTCTTCTACGCTCTCTGGG 94291 |||| ||||| || || |||| ||||| || ||| | ||||| || | ||| Sbjct 82972 GAAAAAACCATGGTTCAGA---GGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGA 82916 Query 94292 TGCCAGACCTTTTTATGAAACGCGTCGA 94319 | ||||||||||| |||||| | || || Sbjct 82915 TCCCAGACCTTTTCATGAAAAGGGTTGA 82888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722389890760