Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq84 197 5e-45 seq58 192 2e-43 seq130 140 1e-27 seq72 95.1 5e-14 >seq84 Length=66450 Score = 197 bits (218), Expect = 5e-45 Identities = 472/702 (67%), Gaps = 20/702 (3%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || ||||| |||||| | |||||||| | |||||||| || |||| |||||| || | Sbjct 58903 GCTATTGGGATTGATTTGGGAACCACTTACTCATGTGTTGGCGTTTGGAAAAATGAAACT 58844 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 |||||||||||||| ||||| ||||| || || ||||| || | || || || Sbjct 58843 GTAGAAATTATAGCCAATGATCAAGGCAACCGTACAACTCCGTCTTATGTTGCCTTCACT 58784 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCA--ATGGTAAATTCAAATGCCAA 451089 ||| || || | | || | || || ||| ||| ||| || | ||| | | Sbjct 58783 GATGTGGAGCGATTGGTTGGCGACGCCGCCAAAAATCAGGATGCTAGA----AATCCTGA 58728 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATAC-TGTA- 451147 ||||||||| | |||||| ||| | || || || | | | || | ||||| | || | Sbjct 58727 AAACACAGTTTTTGATGCAAAAAGATTGATAGGGAGAAAG-ATCA--ATGATCCCTGCAT 58671 Query 451148 -CAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAA--AAAGGAAAGCCCTAT 451204 |||| || | |||| || | | | ||| | | | ||| || | ||| | Sbjct 58670 CCAAAGTGATATAAAACACTGGCCATTTACTGTTGCGGCTGGACCAAATGATAAGCCTGT 58611 Query 451205 ATTCAAG-TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTAT 451263 ||||| || | | | | |||||||||||| | || || || ||||| || ||||| Sbjct 58610 GATCAAGGTACAATTTCAGGGTGAAACTAAATCCTTCCACCCAGAGGAAATATCTTCTAT 58551 Query 451264 GGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGC 451323 ||| || || || ||||| |||| |||||| ||| | || || | || |||| Sbjct 58550 GGTCCTCACCAAGATGAAGGAAATTGCAGAATCTTATTTGGGAAAGACAATCTCTAATGC 58491 Query 451324 AGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG 451383 || || ||||| ||||||||||| || ||| | ||||| || || ||||| || || || Sbjct 58490 TGTTATCACTGTACCCGCTTATTTTAACGATTCTCAACGACAGGCCACTAAGGACGCTGG 58431 Query 451384 ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGC 451443 |||||||| ||||||||| | || ||||| |||||||| || || || || | || Sbjct 58430 TACCATTGCTGGGTTAAATGTTATGCGTATTATCAATGAACCAACTGCTGCCGCAATTGC 58371 Query 451444 ATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGG 451503 ||||| | ||| || |||| || ||||||||| | || | || ||||| || Sbjct 58370 CTATGGTAT-GGACAA--GAAAGGTACTTCTGAAAAAAATGTGTTGATTTTCGATTTGGG 58314 Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563 || || ||| ||| || | | | || |||||||| | ||||| |||||||| Sbjct 58313 CGGTGGCACTTTCGATGTATCAATTTTAACTATCGAAGATGGCATTTTTGAGGTAAAGGC 58254 Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || | |||||||| || | || ||||| || |||| || Sbjct 58253 CACACAAGGTGATACCCACTTGGGCGGTGAGGACTTTGACAA 58212 Score = 134 bits (148), Expect = 5e-26 Identities = 435/664 (66%), Gaps = 16/664 (2%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATG-TTGTCT 451954 ||||| | || |||||||||||||| || || || ||||| || || | || || Sbjct 57918 ATGAAGTGGTACTTGTAGGAGGTTCGACCCGTATCCCTAAGATACAGCAATTGATTAAGG 57859 Query 451955 TCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATAT 452014 ||| ||| || ||| ||| || || | || || || ||||| || || ||| Sbjct 57858 ACTT-TTTCAATGGCAAAGAACCCTGCAAATCAATTAACCCAGACGAAGCAGTAGCCTAT 57800 Query 452015 GGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATT 452074 || || || ||||| || || ||| |||| || | | | || | |||| | Sbjct 57799 GGCGCGGCTGTTCAGGCTGCAATTTTAACTGGCGAACAATCTAGCAAGGTCCAAGATTTA 57740 Query 452075 CTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 |||||| ||||||| || || || || || ||| |||| || || || || | ||||| Sbjct 57739 CTGTTACTAGATGTCACTCCACTGTCACTAGGACTTGAGACCGCCGGCGGTGTTATGACC 57680 Query 452135 AATTTAATTAAACGAGGAA--CTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAG 452192 | || | | || || || |||| || || ||| ||| ||||| || Sbjct 57679 GTGCTGAT--ACCCAGAAATACTACTATCCCCGCCAAGAAGGAACAAGAATTTACAAC-- 57624 Query 452193 CAAGTGA---TAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGA 452249 ||| ||| ||||||| | || || | || || || || |||||||||||| | |||| Sbjct 57623 CAA-TGAAAATAACCAAACGGGGGTTATGATCCAGGTCTTCGAAGGAGAACGTTCTATGA 57565 Query 452250 CACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGG 452309 || | || || ||| |||||| |||| | | | ||| |||||| ||||| | Sbjct 57564 CATGTGACAACAATTTACTAGGCAAATTCCATTTGACTGGCATACCTCCTGCTCCAAGAG 57505 Query 452310 GAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTG 452369 || ||| || ||| || | |||| ||| | ||||| |||||||| | | ||| || Sbjct 57504 GAGTTCCCCAGATTAAAGTCACCTTTGACATCGATGCCAATGGTATATTGACAGTGTCTG 57445 Query 452370 CAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTT 452429 | | || || || | ||||| | ||| | | || || || ||||| || | Sbjct 57444 CTGCCGACAAGTCGACAGGAAAGACTGAACATGTAACTATAACAAATGACAAGGGAAGAC 57385 Query 452430 TATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATG 452489 | || | |||| ||||| | ||||| | ||||||||| || || | ||| ||||||| Sbjct 57384 TTTCACAGCAAGACATTGATAGGATGGTTGCTGAAGCAGAGAAGTTTAGGGAAGATGATG 57325 Query 452490 AACAAGTTAGAAAA--CATGTTGAAGCTAAAAACAAACTAGAAGGATATTGTTATCAAAT 452547 || ||| |||| | ||||||| | || || |||| || ||||||||| ||| Sbjct 57324 AA-AAG-AAGAAGAGGTGTGTTGAATCCAAGAATGAACTTGAGAACTATTGTTATTCAAT 57267 Query 452548 GAAA 452551 |||| Sbjct 57266 GAAA 57263 >seq58 Length=16237 Score = 192 bits (212), Expect = 2e-43 Identities = 220/293 (75%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370 |||||| |||| || | || ||||| || ||||| |||||||| || || ||||| | Sbjct 5439 CAGTTAAAAATGCCGTTGTGACAGTTCCTGCATATTTTAATGATGCCCAGCGCCAAGCTA 5380 Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430 | ||||||||||| || ||||||||||| ||||| | || || | |||||||| |||| Sbjct 5379 CCAAAGATGCAGGTCAAATTGCTGGTTTGAATGTATTACGTATACTCAATGAACCCACAG 5320 Query 451431 CAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAG 451490 | |||||| | || ||||| || || ||| || || ||||||||||||||||| | Sbjct 5319 CCGCTGCTATTGCTTATGGTCT-TGACAAT--AAGGA---TGAAGAAAAAAATATTTTGG 5266 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550 | | |||| | ||||| || ||| |||| ||| ||||| ||||||| | || |||| Sbjct 5265 TCTATGATCTCGGTGGTGGTACTTTTGATGTTTCCCTACTTACAATTGACAACGGTGTAT 5206 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||||| | || || || |||||||| || || ||||||||| ||||| Sbjct 5205 TTGAAGTCATAGCGACATCAGGAGATACTCACCTCGGCGGTGAAGATTTTGAT 5153 >seq130 Length=171689 Score = 140 bits (154), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || |||||||| || |||||||| || || ||||| || ||| | Sbjct 140947 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 140888 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || || |||||||| ||||| |||||||| || ||||| Sbjct 140887 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 140828 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| ||||||| | || |||||| | || || || | || | | |||||||| Sbjct 140827 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 140768 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || ||||||||||| ||||| |||||||| Sbjct 140767 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGG 140723 Score = 102 bits (112), Expect = 3e-16 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 ||||||| || |||||||| || |||||||| || || | || || || | |||| Sbjct 29054 AATATTT--GTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGTGAT 28997 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | || ||| | |||| || ||||| |||||||| |||||||| |||||||||||| Sbjct 28996 ACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAACAA 28937 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 || | ||||| | || || ||||| ||||| || | ||| || | || || |||||| Sbjct 28936 CGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAATATT 28877 Query 391233 GATAAGGA 391240 | || || Sbjct 28876 CAAAAAGA 28869 >seq72 Length=60542 Score = 95.1 bits (104), Expect = 5e-14 Identities = 229/344 (67%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 451260 CTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTG 451319 |||| ||| | | |||||||| |||||||||||| | | ||| || || | Sbjct 19293 CTATTGTTTTATCAAAAATGAAGGAAACAGCAGAAGCTCACTTGGGTAGACCTGTGAGAA 19234 Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 | ||||| || || || ||||||||||| || ||| ||||| | || || || || |||| Sbjct 19233 AAGCAGTGATAACGGTACCCGCTTATTTTAACGATTCACAAAGACAGGCGACAAAGGATG 19174 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || | || || ||| | | ||| | | || ||||| ||||| || |||||||| | Sbjct 19173 CGGGTAAGATCGCAGGTCTTGAAGTTTTGAGGATAATTAACGAACCAACGGCAGCTGCGC 19114 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || | ||| | | | ||||| || | |||| ||| ||||| ||||| Sbjct 19113 TTGCCTTTGGTTTGG-------AGAAGAA--TGATGGTAAAACAATTGCAGTATATGATT 19063 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | || || || || |||| ||| | || || | || || |||||||||| Sbjct 19062 TGGGCGGTGGCACCTTCGATATCTCTATCCTGGAGATATTGGGCGGTGTGTTTGAAGTAA 19003 Query 451560 AGGCAACCAATGGTGATAC-TCATCTAGGAGGTGAAGATATTGA 451602 | ||||| ||||| | || |||| | || || ||||| |||| Sbjct 19002 AAGCAACTAATGGAAACACTTCAT-TGGGGGGCGAAGACTTTGA 18960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715083880148