Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_019513.1 Length=45552 Score E Sequences producing significant alignments: (Bits) Value seq11 100 8e-17 >seq11 Length=2611 Score = 100 bits (110), Expect = 8e-17 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 31692 TTGGCCTTGTCTTGCTAATTGCTTAGATAAATGCATATACCAGTT--CCATTCATTAGCA 31749 |||||||| || ||||||| || ||| |||||||||||||| | || || | Sbjct 1494 TTGGCCTTTACTAACTAATTGTTTGCTTAAGTGCATATACCAGTTAGTTAATCCTT--TA 1551 Query 31750 CCAGTCTTAATTTGTATAGAATTACCGCCACCGTAATCAGTCCATACCTTATCTGCTATA 31809 || | | || || ||||| |||||||| || || ||| ||||||| || | || || Sbjct 1552 CCTATATCAACTTCAATAGATTTACCGCCGCCATAGTCATTCCATACTTTTGATACTTTA 1611 Query 31810 CCACCTTTAACGGCATAAACGTTTGTTCCAGAAGGCATACCAAAGTCTATACCATAGTGA 31869 || || ||| || | ||||||||| || | ||| |||||||| | ||||||||| Sbjct 1612 CCTCCAGCAACAGCTTTAACGTTTGTACCTGGCATCATGCCAAAGTCCACACCATAGTGT 1671 Query 31870 CGACCGCCATTAAAGTTAAGTCCACCTGTGTAGCGTCCAAATCTTTGCCAGAT 31922 ||| || ||||| | |||||| |||||| || ||| | ||||| || Sbjct 1672 TTACCACCGTTAAATCCTAATCCACCAGTGTAGTTACCGAATTTCTGCCAAAT 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145644573431308