Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq130 127 2e-24 >seq130 Length=171689 Score = 127 bits (140), Expect = 2e-24 Identities = 163/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607 ||||||||||||||||||||||||||| | |||||||||||||| ||| || |||| Sbjct 140952 GTAAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAA 140893 Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667 ||| || || | | || | ||| || || ||||| |||||| | ||| Sbjct 140892 CCTAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCC 140833 Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCG 28725 |||||||| |||| || ||||| || ||||||||||| || || | ||| | | | Sbjct 140832 GATCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTT--CAG 140775 Query 28726 ATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 |||||||||| ||||| ||||| || || ||| | || ||||| Sbjct 140774 ATTATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAG 140732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404120814649