Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_023582.1 Length=92417 Score E Sequences producing significant alignments: (Bits) Value seq34 152 3e-32 seq11 107 1e-18 >seq34 Length=2636 Score = 152 bits (168), Expect = 3e-32 Identities = 219/309 (71%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 24506 AGATGGAACATGGAGAACAGAAAATATAGGAGATAGTTATTCATACACACTGGATTGTAA 24565 |||||| || |||||||| ||| | | | ||||||||||| | | || ||||| Sbjct 2636 AGATGGTACTTGGAGAACTGAATTTGTTGATAATAGTTATTCAAAAGAGTTTGAATGTAA 2577 Query 24566 GTGGGGAGATGAAACATTAATTTGGACACTTaaaaaaaTGTCTAAAGGCGGAACACTAGA 24625 |||||| | ||||| ||| ||||| | || |||||||||||||| || | | || Sbjct 2576 ATGGGGAAACGAAACGTTAGAATGGACTTTAAAGAAAATGTCTAAAGGTGGTTTAATTGA 2517 Query 24626 TGTTTATCTTGATAACAAGAAAATAGGTAGTTATGATTGTTATAGTGAGAATGCTAAAAC 24685 ||| || || || || || || ||| ||||| ||||||||| | | |||| | Sbjct 2516 TGTATACCTAGACAATAAATTGATTGGTTCATATGAGTGTTATAGTAAAACAGCTACGAG 2457 Query 24686 AGAAAAGAAAACACTTTCTAAAAACCTTTCAAAAGGTAAACATACTTTTAAAGCAGTATT 24745 || || | | | || ||| || | || |||||||||||| ||| ||||||||||| Sbjct 2456 TGAGAAAATAGTAATTGCTAGGAATTTATCGAAAGGTAAACATGTTTTCAAAGCAGTATT 2397 Query 24746 TACTGGAAAGAAAAATGGTGTCGATTATAAAAAATCAAAACCTTGTATGTATATTGGAAC 24805 || || || |||||| ||||||||| |||| ||| | |||||||| | ||||| Sbjct 2396 TAGAGGTGCTAAGCCTGGTGTGGATTATAAAGAATCGAAAGCATGTATGTACGTAGGAAC 2337 Query 24806 TGAAAAATC 24814 ||||||||| Sbjct 2336 TGAAAAATC 2328 >seq11 Length=2611 Score = 107 bits (118), Expect = 1e-18 Identities = 228/337 (68%), Gaps = 20/337 (6%) Strand=Plus/Minus Query 20878 GACATGGTTGGTGGCGTTAAGAAAGGGCTTAATGGATTAATCAAAGGTGTAAACTGGGTT 20937 |||||| | ||||||||| | ||||| || ||| | ||||| |||||| | || ||| Sbjct 2495 GACATGATGGGTGGCGTTGAAAAAGGTCTGAATAGTTTAATTAAAGGTATTAATAAAGTT 2436 Query 20938 GGTGGAAAATTAGGTATAGATaaaaaaaT------ACC---TACATTATCTACTGGTACA 20988 ||| | |||| || | ||| |||| ||| || | |||| || |||||| Sbjct 2435 GGTTCTATGCTAGGCATGGGGAAAGAAATGATTAAACCAGTTAAACTATCAACGGGTACA 2376 Query 20989 GAATCTACACATACACAAAACTTTGTTAGAAATGGCGCTATTAGCACACCAACTTTAGCA 21048 ||| | | | | || | ||| |||||| || || || | || || ||||| Sbjct 2375 GAAGGTGC---TTCTGGTAATGTAGTTTCAAATGGTGCAATAAGTAGCCCTACATTAGCT 2319 Query 21049 ACAGTTAATGACAAAGGACCTGGTAATGGTACTGGTAGAAAT----GGACATCAAGAATT 21104 ||||| ||||| | || || ||||| | || | || ||| ||| ||||||| || Sbjct 2318 ACAGTGAATGATAGTGGTCCAGGTAACG---CTCG-AGGAATCGGAGGATATCAAGAGTT 2263 Query 21105 AATTCAACGTAAAAACGGTTCATTATTTGCACCACAAGGAAAAGATGTAGTAGTTCCATT 21164 | ||||| | ||||| || ||||||| |||||||||||||| | ||| || Sbjct 2262 AGTTCAAAAGAGTAACGGCTCGGTATTTGCTCCACAAGGAAAAGACGCTACAGTAATGTT 2203 Query 21165 AAATAAAGGCGATAAAGTTATTAATGGTAAAACTACT 21201 | |||||||||||| ||| ||||| ||| |||||| Sbjct 2202 AGATAAAGGCGATAGAGTAATTAACGGTCGTACTACT 2166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295609128040798