Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq130 203 6e-47 >seq130 Length=171689 Score = 203 bits (224), Expect = 6e-47 Identities = 184/232 (79%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| | | |||||||| || || ||||| || ||||| |||||||| || Sbjct 140720 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAA 140779 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||| || | ||||||||||||||| ||||||| ||||||||| || || Sbjct 140780 AGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGA 140839 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| ||||| ||||||||||| || |||||||||||||| |||||| ||||||| || Sbjct 140840 ATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACC 140899 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTA 82815 || | ||||| || || || || | || ||||||||||| |||||| ||| Sbjct 140900 TCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTTTA 140951 Score = 179 bits (198), Expect = 7e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || || |||| |||||| ||||| || ||||| || || || ||| | | ||||||||| Sbjct 28851 ACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCTTCT 28910 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 ||||| || |||||||| || |||| ||||||||| || || ||||| |||||||| ||| Sbjct 28911 AGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCCTGA 28970 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| || || |||||||| || |||||| | || ||||||||||| || || || || Sbjct 28971 ATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTTTTA 29030 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || |||||||| ||||| Sbjct 29031 CCCGTGAGTGTTTTCACAAATATTTGCAT 29059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825552064409