Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_028962.1 Length=140961 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 4e-14 >seq11 Length=2611 Score = 93.3 bits (102), Expect = 4e-14 Identities = 187/277 (68%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 24697 AAATGGAAAGATGATATTAGAAAAGCCGCCAAAGCAATGGGTGTTAAAATATCAGATAAA 24756 |||||||||| ||||||| | || |||||||||| ||| |||| | |||| || Sbjct 1331 AAATGGAAAGGCGATATTAAACGTGCTGCCAAAGCAACGGGAACTAAATTGTCAGGTAGT 1272 Query 24757 GATGTAGACGGAATAGCAAGTCTTATTCAAAAAGAATCTGGTGGAGACCCTAAAATAAAA 24816 | || ||| || | | |||||||| | |||||| ||||||||||||| | | Sbjct 1271 AAATTAAACGATATCGTTAAACTTATTCAGACTGAATCTAATGGAGACCCTAAAGTTACT 1212 Query 24817 CAACAAATT---AAAGATATAAACAGTGGCGGTAATGAGGCACAAGGTCTTTTACAATAT 24873 ||||| | | |||| | |||||||||||||||||||||| ||| | | ||||| Sbjct 1211 CAACATGGTTACACAGATGTTAACAGTGGCGGTAATGAGGCACGTGGTTTACTTCAATAC 1152 Query 24874 GTTCCTAGTACTTTCAACAACTATAAAGTAAAAGGACATGGAAACATTCATAATGGATAC 24933 |||| | || || || ||| ||||| ||||| |||| || || | | Sbjct 1151 ACTCCTGGAACATTTGCAGGGTACAAAACTAAAGGTGGAGGAAATATTCTAAACGGCTTC 1092 Query 24934 GACCAATTATTAGCTTTCTTTAATAATAAAAACTGGA 24970 ||||| | ||| || || ||||| | || |||| Sbjct 1091 CACCAACTTAAAGCCTTTTTCAATAACAGTAATTGGA 1055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450946461573960