Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_029025.1 Length=41843 Score E Sequences producing significant alignments: (Bits) Value seq11 105 2e-18 >seq11 Length=2611 Score = 105 bits (116), Expect = 2e-18 Identities = 233/348 (67%), Gaps = 6/348 (2%) Strand=Plus/Minus Query 13195 ATGGAAACCTGATATCAGACGCGCTGCTAAAGCAATAGGAGTTAGAGTATCTAGCGCTGA 13254 ||||||| ||||| | ||| ||||| ||||||| ||| || | | || | | | Sbjct 1329 ATGGAAAGGCGATATTAAACGTGCTGCCAAAGCAACGGGAACTAAATTGTCAGGTAGTAA 1270 Query 13255 TGTGAATGACGTTGCTCGACTTATCCAAACAGAAAGTAGCGGTAATGCTGGCGTTACTCA 13314 | || || | | | |||||| || || ||| || || | || |||||||| Sbjct 1269 ATTAAACGATATCGTTAAACTTATTCAGACTGAATCTAATGGAGACCCTAAAGTTACTCA 1210 Query 13315 ACAAATTCA---AGATGTGAACAGTGGCGGTAATGAAGCACAAGGCTTACTACAATATAC 13371 ||| | | |||||| ||||||||||||||||| |||| || ||||| ||||| || Sbjct 1209 ACATGGTTACACAGATGTTAACAGTGGCGGTAATGAGGCACGTGGTTTACTTCAATACAC 1150 Query 13372 ACCAGGATCATTTAACAGTTATGCAATTAGAGGACATAAAAACATTAAAAACGGTTACGA 13431 || ||| ||||| | || || || ||| ||| ||| |||||| | | | Sbjct 1149 TCCTGGAACATTTGCAGGGTACAAAACTAAAGGTGGAGGAAATATTCTAAACGGCTTCCA 1090 Query 13432 CCAATTACTCGCCTTCTTCAATAACACAGATTGGCGTGCTAATTTATCTTACTGGAAACG 13491 |||| | ||||| |||||||||| ||||| | | | | | | | |||||| Sbjct 1089 CCAACTTAAAGCCTTTTTCAATAACAGTAATTGGAGCGGTGACCTTGCATCATGGAAATC 1030 Query 13492 TCGAATGGCTAGTGGCTTAACTGGTTGGGGGCCAACTGG---TAGACG 13536 ||||||| || || |||||||||||||| || ||||| |||||| Sbjct 1029 AAGAATGGCAAGAGGTTTAACTGGTTGGGGCCCTACTGGGTCTAGACG 982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133775791894710