Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq86 111 3e-19 >seq86 Length=883075 Score = 111 bits (122), Expect = 3e-19 Identities = 240/355 (68%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 281730 GGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCT- 281788 |||||||| ||||| || ||||| | ||| | ||||||||||||| ||| Sbjct 116591 GGGTTCAGCTTCGTAAAAATATAACGTGCGGCAGATGCATCTTTACCACCCT----CCTT 116536 Query 281789 -CGAC--CCAAACTGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAA 281843 |||| ||||||||||| ||| | | ||| ||| || || || ||||| | Sbjct 116535 ACGACTACCAAACTGACCACACGGTTCTAAAAC--GTTGATATTGTTTGAACCGACAAAG 116478 Query 281844 TCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTG 281903 | || |||| |||| |||||| || | ||| |||| |||||||| || || Sbjct 116477 TTTTGGGCCATATTGATGATTGTTTGTTGTAACGAAGCCTCGCCGTGGTGGTAAGCCGAA 116418 Query 281904 TGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTG 281963 ||||| ||||||||||| | | ||||| ||||| || | ||||||||||||| Sbjct 116417 TGTTCAGCAACATAACCTGTAAGTTGTGCGACCTTACATTCACCTACCAAGTTGCGTTTG 116358 Query 281964 AAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATG 282023 | | | | |||||||||| |||||| || || |||| ||||| || || || || Sbjct 116357 AGACATCCAAATAATACTTTACGTTGACCTGGTTTCCAACCGTCAACCACTGATGGGATA 116298 Query 282024 CTGCGTTCCAGGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGTCGG 282078 || ||||| ||||| || || || |||||||||| ||| || |||| Sbjct 116297 CTACGTTCTGTATCATATATGGAAAATTGGATCAGTTCCTTGTTAATAAAATCGG 116243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821086025450