Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq37 118 9e-22 seq1 98.7 9e-16 >seq37 Length=429747 Score = 118 bits (130), Expect = 9e-22 Identities = 360/546 (66%), Gaps = 24/546 (4%) Strand=Plus/Minus Query 132878 GTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGT 132937 ||| || |||||||| |||| | || || |||| || ||||||||||| || || Sbjct 384055 GTCCACTGTAAACTTGATGGCATCAGTTGCCGGTTGCGTACGCAAATAATAAGCACCGGT 383996 Query 132938 TTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACC--ACCGAGTAAGTGGGT 132995 || || |||| ||| |||||||||| ||||| | | ||||| | || ||| Sbjct 383995 CTTAAGACCCTTCTTCCATCCGTAAAAGTGCATGCTAGTAAGTTTACCGA--ACGTAGGT 383938 Query 132996 TCGGCGACAAATAAAT--TCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGG 133053 | || || ||||| | |||||||| ||| || ||||| | ||||| || | Sbjct 383937 T--GCTCCAGGTAAATGTTTAGCGATTGCGACTGGTCAATGAACACTCCTCGGTCAGCAG 383880 Query 133054 CCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGATTCTTGACAT 133113 |||||| || || |||| ||||||||||||| |||||||| | |||| ||||| | Sbjct 383879 CCATGTCGATAATGGTCTTTTGTTTGATCTCCCATACCGTCTTGTAAAGATCCTTGATGT 383820 Query 133114 GCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAA------TCTTGT 133167 |||| || || | ||||||| | | ||| || || | || | || ||| Sbjct 383819 GCTGAGGGATACCCTCAATGTGTCGTAAGGATCCATTGTAAGCAATAAGTTTTTCCTTCA 383760 Query 133168 TGCGC-AATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGGTTG 133226 ||| | || || |||| | ||| | | | | |||| | | | |||| Sbjct 383759 TGCTCTCATCCCAGAGT-CCCAGGTCCACAAGG--TCGCGC----AGCAAGTGAGGGTTC 383707 Query 133227 ACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGA-TATACATTCGACGTGAACGGTTC 133285 || || ||||||||| || || || | || | || | ||| |||| | ||||| Sbjct 383706 ACAACGAAAAACTCGCCACTAAGCACACG-CCGATAGTAGATATTGCTCGTGTAAGGTTC 383648 Query 133286 GAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACCAA 133345 |||||| |||||||| || || ||||| | ||||| ||||||||||| |||| || Sbjct 383647 GAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGATGCCGTGGGCATCGGGGCCAAGAA 383588 Query 133346 CAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCACAG 133405 | ||||| | | ||||| ||| ||| | || | |||| |||||||||||| Sbjct 383587 TAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCGACGCTTGAGATCGTCCCAGTCCCACAG 383528 Query 133406 ATTGTT 133411 ||||| Sbjct 383527 TTTGTT 383522 >seq1 Length=768689 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||| ||||| ||||| ||||| || || || || |||||| Sbjct 684069 ACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCA 684010 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || |||||| | || | ||||||||| || ||||| || |||||||||||| Sbjct 684009 AGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 683950 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | ||| | |||||| || ||| ||||| | || | ||||| Sbjct 683949 ATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTA 683890 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | || || || ||||||||||| Sbjct 683889 CCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829263228780